Cryptomeria japonica (Japanese cedar): 131073181
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Entry
131073181 CDS
T10556
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB1 isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03022
Basal transcription factors
cjf03420
Nucleotide excision repair
Brite
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131073181
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131073181
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131073181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131073181
NCBI-ProteinID:
XP_057865564
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Position
2:complement(139950141..139974927)
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AA seq
650 aa
AA seq
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MEYECAGKEKKCLTLKADNERRPLWVSAMGSIILETSSEFYKEAADFCIAIAEPESRLRH
FHEYKITPASLYGAASAGLDAEKMIKYLKMLCKTDLAPEIIHMIQKHTENVGKLALYLKD
GSIVVEGISVQPIKTILPYVRDVVIEKISEKSFKIEPLKIEFVRQKCREINFPLVEIYDY
KNDKTCPDLGIKLSPKAQLRPYQKKSVDKIFINGKARSGVIVLPCGAGKSLTGVYAAVRL
GKPCLCFANTSVSVDQWVFQFKMWSTIGANRIQGITSNTKACEVNLKADILVTTYSMYGY
TGHRSKDSEEIIKVIEGREWGLILMDEVHMVPARNFRDAVARTKSHCKVGLTATLLREDE
AIQDLEFIIGPKVYEANWQELVEGGYLANVECYEVLCPMSKEYMREYLKTYHSYHGGGFY
GEDNKNIQHTLYSSNPNKLMACEYLIKYHEQQRDKIIVFSDNLFSLDQIGTRLQKLIIRG
ETSHQERTEVIKRFKESDKGFTVLLSKVGDTSLDLPEATVVIQISSQGGSRRQEAQRLGR
VLRPKPTKDKFGVITGGQAVFYSLVSQDTIEMCFASKRQQFLVNQGYTFTSMTNIPTKEE
SSSLLFSREDVQAQLLHLALQSKCDQEQKQPPEKKKKREHKSSLFKKRFK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaatgcgcaggaaaggagaaaaaatgtctaactctcaaagcagataacgaa
agaaggccattgtgggtatcagcaatgggcagcataatcttggaaacatcttcagaattt
tacaaagaagccgccgatttctgcattgcaattgcagagccggagagcaggcttcggcac
ttccatgaatacaaaatcacaccagcttcattatacggtgcagcctctgcgggcttggat
gcggagaaaatgataaagtatctcaaaatgctgtgcaagactgatcttgcccctgagatt
attcatatgattcaaaagcacactgaaaatgtggggaaattggctttgtatttgaaagat
gggagtattgttgtggagggcatttcagtgcaacccattaagaccattttgccctacgta
agggacgttgttatagagaaaatatcagaaaagagtttcaagatcgagccattgaagatt
gagtttgtgaggcaaaagtgcagggaaatcaattttcctcttgtagaaatatatgactat
aagaatgataagacttgtcctgacttgggcataaaactaagccctaaagcgcagcttagg
ccttaccagaagaaaagtgtggataaaatctttataaatgggaaggccagatctggggtt
attgttcttccctgtggagcgggtaaatcgttaactggggtttatgctgctgttcggttg
gggaaaccatgcctgtgctttgcaaacacatcagtgtctgtagatcaatgggtttttcaa
ttcaagatgtggagcacaattggggctaatagaatacaagggattacaagtaataccaag
gcctgtgaggttaacttgaaggcagatattttggttactacttatagtatgtatggatac
actggtcataggtctaaggattctgaggagattataaaggtgatagagggaagagaatgg
gggttgatcttgatggatgaggttcatatggttcctgcaaggaattttagggatgctgtt
gcgaggaccaaatcacactgtaaagttgggctgactgcgacgcttcttagagaggatgag
gctattcaggatcttgagtttatcatcggccccaaggtttatgaggcgaattggcaagag
ttggtagagggtgggtatcttgcaaatgtagaatgctatgaagtgttatgccccatgtcc
aaggaatacatgagagaatacttgaaaacctatcactcatatcatggtgggggtttctat
ggtgaagacaacaagaatattcaacacactctctatagttccaaccccaacaagctcatg
gcttgtgagtatctcattaaatatcatgagcaacaacgagacaagatcattgttttttct
gataacctattttctttagaccaaattggtactcgattacagaagctcataattcgtgga
gagactagccaccaagagagaactgaagtcatcaaaaggtttaaagagtctgataaaggg
ttcactgttttgctctcgaaggtgggagatacatcactggatctgccagaggcgacagtg
gtaattcagatatcatctcagggtggatcaaggaggcaagaagcccagcggctaggtcgt
gttctacgtccaaagcccaccaaagacaaatttggcgttataacgggtggccaagctgtt
ttctactctcttgtttctcaggacaccattgaaatgtgctttgccagtaaaagacaacag
ttcttggtgaaccagggctacactttcacctctatgactaacattcccacaaaggaggag
tcttcttcactcttattttctagggaagatgttcaggcccagctgcttcaccttgctctc
caaagcaaatgtgatcaggaacagaaacagccgcctgagaagaagaagaagagagaacat
aaaagtagtttgttcaaaaagaggttcaaatga
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