KEGG   Cryptomeria japonica (Japanese cedar): 131073365
Entry
131073365         CDS       T10556                                 
Name
(RefSeq) protein RRC1
  KO
K12842  U2-associated protein SR140
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131073365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131073365
Spliceosome [BR:cjf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131073365
 Complex B
    131073365
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 SAP CTK3
Other DBs
NCBI-GeneID: 131073365
NCBI-ProteinID: XP_057865763
LinkDB
Position
10:661647055..661723466
AA seq 1054 aa
MNSFSVVRKKTPFQKHREEEEAKKKREDDEAARLYEEFVQSFNGDDIPCGKTFVRGGTIN
PNERLKSGNEDGSSKDGSSSSKKGSRYIPSFIPPGMAGSASLGKETDKKREDEKSKEKAK
GKMRNIDNFMEELKLEREMREKRNQDREHRQEGRPNEISMPVSHFDEIPEELDSSGRLLG
SFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEEHRRQRNCGFVA
FMNRADGQAAKDEMQGVVVYEYELKIGWGKSVTLPSQALPAPPPGHMAVRNKEGHTVTWS
GPGGPSLSGVTSQVSELVVTPNIPDIGVIPPEDEHQRHVIDTMAMYVLDDGCSFEQAIME
RGRGNALFNFLFDLGSKEHSYYVWRLYSFSQGDTLQRWRTEPFIMITGSGRWIPPQLPQQ
TGKSPEHERDSGTTYAAGRSRRVDLERPLTESQRDEFEDMLRALTLERSQIKEAMGFALD
NADAAGEVVEVLTESLTLKETLLPIKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPD
IMESFNDLYRAITGRITAEALKERVLKVLQVWSDWFLFSDVYVSGLRATFLRPGNSGVSP
FHSICGDAPPVKGTSSSQELGNDVLEGTKENQDAALAIGKGAAVKELSSLPLAELERRCR
HNGLSIRGGREMMVARLLSLDEAEKQKAQDHDAVFQYGRSYPLRHGRESNSTSRSEGKWN
SVGGWSTGSGEWKEVNLGAGREQRELSQNLGDSSGWPYHEDGMQQSALTQSPKLAIPQPE
LKPFASKAGKTEPILPASKWTREDEGGDAEGKQDAQGLGLGYSSSGSEDSHGIEKGERQE
ATVDSFPLANDTGMNEEQRQKLRKLEVAVMEYRESLEERGMSNLEEIERKVDVYRKKIKS
EFGLTDETTDGENTATSRNGKQSTRVSESISSDRKNRRNEHRNSSSKKHAHSRRSHSMSP
HKASRDRDREREVNRDRDREREKEIVRDCDRDRLRERDWERDRVRELETERGREREKSSS
RDRDDHDRDMIREKDRGRDRDGDRERERKRKVRG
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgaattcgttttcagttgttcgaaaaaaaactccttttcaaaagcatagagaagaagaa
gaggctaagaaaaagagggaggatgatgaagcagctcggctgtacgaagagtttgtgcaa
tctttcaatggagatgacattccttgtgggaaaacttttgtgagaggggggacaataaat
cctaatgagcgtctgaaatctgggaatgaagatggatcatccaaagatgggtcctctagt
tcaaagaaaggaagcaggtatataccatcgtttataccacctggaatggcaggttcagcc
agtttggggaaggaaactgataaaaagagagaagatgaaaaaagtaaggagaaggcaaag
ggaaagatgcgcaatatagataatttcatggaagaattaaagctagagcgagaaatgagg
gaaaaacgcaatcaggatcgtgagcatcgacaagaaggaaggccaaatgaaatctcaatg
cctgtaagtcattttgatgaaattccagaggagctcgattcaagtggaagactgttgggg
tcatttgatgatggagatcctcagacaactaatctttatgtaggaaatttgtcaccgcag
gtggatgaaaatttcctcttacgcacctttggtcggtttggccctattgccagtgtcaag
ataatgtggccaagaacagaagaggagcatagacggcaacgcaattgtggctttgttgct
tttatgaacagagctgatggtcaggcagcaaaggatgaaatgcaaggtgttgttgtttat
gagtatgaactgaagattggatggggtaaatctgtgacgcttccttctcaagctcttcct
gcaccacccccaggtcacatggctgtcagaaataaagagggtcatacagttacatggtca
ggtcctggtggcccatcactttctggtgtaacaagtcaggtgtctgagttggttgtaact
ccaaatattcctgacattggggttattcctccagaagacgagcatcaaagacatgttatt
gacaccatggcaatgtatgtgctcgatgatggatgttcctttgaacaagcaataatggaa
aggggacgtggcaatgcacttttcaatttcttatttgaccttggatccaaggagcatagc
tactatgtatggcgactgtattcattttctcagggagatacacttcaaagatggcggaca
gagcctttcatcatgataactggaagtgggcggtggataccgccacagttaccacaacag
acaggaaagagtccagagcatgaaagggattctggtaccacctatgcggctggaaggagc
aggagggttgacctggagcgcccactaactgaaagtcagagagatgagtttgaagacatg
ctccgagctttgaccttagaaagaagccagataaaagaagctatgggttttgccttggac
aatgctgatgcggcaggagaggtagttgaggttcttactgaatctttgaccctgaaggaa
acccttcttccgatcaaagtggcaaggcttatgctggtttctgacattcttcataacagc
agtgcacctgtaaaaaatgcatctgcttatcgtacaaagtttgaagcaactctacctgat
attatggaaagttttaatgatttatatcgagccatcaccggccggattactgcagaagct
ttgaaggagcgtgttttgaaagttctccaggtttggtcagattggtttctcttttcagat
gtttatgtgagtggactgagagctacttttctgcggcctggaaattcaggtgtttcacct
tttcattcaatttgtggagatgctccaccagttaagggcactagcagttcacaagagctc
ggcaatgatgtgttagaaggaactaaagaaaatcaagatgctgcactggccattggaaag
ggagcagcggttaaagaattgtcaagtcttcctcttgcagaacttgaaagacggtgtagg
cataatgggctatctattcgtggtggaagggagatgatggttgcacgtctgcttagctta
gatgaagcagaaaaacaaaaagcccaagatcatgatgctgtctttcaatatgggcggagt
tatccattgagacatggaagagaaagcaacagcacttctagatcagaaggaaaatggaat
tcagttggaggttggagcacgggtagtggtgaatggaaagaagtgaatcttggtgctggt
agggagcaaagggaattaagtcagaacttaggggattcttctggatggccatatcatgaa
gatggtatgcagcagtctgctctcacacagtctcctaaactggcaattccacagccagag
ctaaaaccatttgcaagcaaggctgggaaaactgaacctattctaccagcctctaagtgg
acacgggaagatgagggtggtgatgctgaaggaaagcaggatgctcaaggtcttggtttg
ggttactcttcttctggtagtgaggactctcatggtatagaaaaaggtgagagacaagaa
gctactgtggacagctttcctttagccaatgacacaggaatgaatgaagaacaaaggcaa
aagcttcgtaaattggaggttgcagtgatggagtatcgtgagtctcttgaagaacgtggc
atgagcaatctagaagaaattgaaagaaaagtggatgtttacagaaagaaaattaaatct
gaatttggtttaacagacgaaacaacagatggggagaacacagcaacatctagaaatgga
aagcagtcaactcgggtctcagagagcatctcttctgaccgaaagaatagacggaatgaa
cacagaaattcatcttcaaagaagcatgctcatagtcgtcggagccacagtatgagtcct
cataaagcaagtagagacagggacagagagagagaagtaaatagagatagggacagagag
agagagaaagagattgttagagattgtgatcgtgatcgtcttcgcgagagagattgggaa
agagacagagttcgtgagcttgaaactgaaagaggaagggaaagggaaaagagtagtagc
agagatagagatgatcatgacagggacatgataagggagaaagatagaggccgtgataga
gatggtgacagggaacgagaaagaaaaagaaaagtaagaggatag

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