Cryptomeria japonica (Japanese cedar): 131073435
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Entry
131073435 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131073435
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131073435
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131073435
MMR (mismatch excision repair)
131073435
DSBR (double strand breaks repair)
HR (homologous recombination)
131073435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131073435
NCBI-ProteinID:
XP_059064255
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Position
7:complement(104071734..104073953)
Genome browser
AA seq
579 aa
AA seq
DB search
MASSAATSESIDHSTIDNLGKNQEYVPTPFAIQSINSGDDLPSTLLQVLSFQKMQNNTDD
TDRHKLVLSDGKYMQTIVILSLEVKQSVFPFFGKPEYLFKEQQPEIMSEDRPSTSKWSLQ
FATELPSPQTTTSENISPIKTLNPYQNKWTIKGKVTHKRPIKAYSTTAKNGHVFSFDIVD
CDGSEIRITCFDEIAKLHYNCVDIGSHYIISKGSIKEANARYNKLNNHLEITLSNTSIVK
RCTNEEQVVQQTAPFTPIGELFQLTNNTLVDVIGIVLYVGDTIPIHRKYGNQTQKCVVKI
NDLSGSIIDINLWGPIAKQKGLEWKNMLTNDSVVILSLHNAHVGYFNGKLVNIIAATTLH
INPSFLEAELLTSRGRDPLLALPFVAETIHIDDKYTRMTISLICERMSIKPKTIQTTLLA
ILRYVNVNDQNFYYTACPLIVNGRPCKKKCTQQADDSWFYSRCQMNMQDYNYSYLLPLKL
QDATSTLWATSFDEGGNHLLHKTTRQLYTLQNDATTKETPSSVIKAVLSHYYSFTVLVCT
ETYNSESKMKVTVKKVAPVDFKAECHALLAEISCLSTKP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcagcagctacctctgaatccatagaccattccactattgataatttggga
aaaaaccaagagtatgtccctaccccttttgcaatccaatctatcaattctggggatgac
cttccttcaacattgctacaagttttgtcatttcagaaaatgcagaacaacacagatgat
actgacagacataaactagtattatctgatggcaaatacatgcagactattgtaatactt
agtctggaagtgaaacaaagtgttttcccattctttggaaaaccagaatatctattcaaa
gaacaacaaccagaaattatgtctgaggatagaccatcaacatctaaatggtcacttcag
tttgcaactgaattgccatccccacaaacaacaacttctgaaaatataagtcctataaaa
actttgaatccataccaaaataaatggacaatcaaagggaaagttactcataaacgacct
attaaggcatatagcacaaccgccaaaaatggccatgtctttagctttgacattgttgat
tgtgatggttctgaaattagaattacatgttttgatgagatagctaagttacactataac
tgtgtggacataggttcacattatattatttcaaaaggatctattaaggaggcaaatgca
aggtacaacaaactaaacaatcatttagaaatcaccttgtctaatacatccatagtaaaa
cgctgcaccaacgaagaacaagtagttcaacaaactgctcctttcacacctattggcgaa
ttgtttcaactaacaaacaatacactagttgatgttattggtattgttctatatgttgga
gataccattcctattcataggaaatatggcaatcaaacacaaaaatgtgttgtgaaaatt
aatgatctatctggttcaataattgacatcaacttatggggcccaatagcaaaacaaaag
ggtctggaatggaaaaatatgttgaccaatgatagtgtggtgatcctttctttacataat
gctcatgttggctatttcaatggcaagcttgtgaacataatagctgcaacaacattacat
atcaacccaagtttcctagaagcagagcttctaacttcaagaggaagggaccctttgctt
gctctaccctttgttgcagaaactatccacatagatgacaaatatactagaatgacaatc
tctttgatctgtgagcggatgagcatcaaaccaaaaacaattcagacaacattgctagct
attctacgctatgtcaatgtcaatgaccaaaatttctattacacagcttgcccactgata
gtcaatggaaggccttgcaagaaaaaatgtacacaacaagctgatgattcttggttctac
tctagatgtcaaatgaatatgcaagactataattatagttacctcttgcctctaaagttg
caagatgccacaagtactctatgggccacttcttttgatgagggtggtaatcacttgcta
cacaaaactacaagacaactctatacactacaaaatgatgcaacaacaaaagagacacct
tcctcggtgatcaaggcagtactttcacattactattcattcacagtgttggtttgtact
gagacatacaattcagaatccaagatgaaagtgacggtcaagaaagttgctcctgttgac
ttcaaagctgagtgccatgcactgcttgcagaaatcagctgcctaagtacaaagccttag
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