Cryptomeria japonica (Japanese cedar): 131073517
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Entry
131073517 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131073517
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131073517
Enzymes [BR:
cjf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
131073517
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131073517
Prokaryotic type
131073517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
131073517
NCBI-ProteinID:
XP_059072050
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MGKSLHTLTHGWQYQIKPATVQCIVGDALTKITKLGRKELGLVGASRTDAGVHAWGQVAH
FTTPFFFDQLESLHAGLNGVLPPDIRVREVAAVKTDFHARYSALKKTYHYKIYNDAIMDP
FQNLYAYHFAHKLNIDVMRQAAKYFIGQHDFSAFITMSRGGLPTDPRREIFRFDVVKMGA
NIQLEIEGSGFFYKQVRNMVALLLEIGKEAVPAEVVFDVLASCDRRTLARHCIIVPPQGL
CLMSVTYATTDLETPPGSPTACYGRQPQISKCTLVYY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaagcttgcatacccttacgcatggatggcagtatcagataaaaccagcaaca
gtgcaatgcattgttggggatgccttaacaaagattacaaagttgggaagaaaggagctt
ggcttggttggtgcaagccgaactgatgcaggtgtccatgcgtggggtcaggttgcgcac
ttcacgactcctttcttttttgatcagttggaaagtttgcatgcaggccttaatggcgtt
cttcctcctgatattagggtgagagaggtagctgcagtgaaaactgattttcatgcacga
tattcagctttaaagaaaacttatcattacaagatatacaatgatgctattatggatcca
tttcaaaatctttatgcataccactttgcccacaagctcaatattgatgtcatgagacag
gctgccaaatatttcattgggcaacatgacttttctgcctttataacaatgtcacgagga
ggtttacctacagatcccaggagggagatttttcggtttgatgtagttaaaatgggtgca
aatatacaacttgaaattgagggatcgggttttttctacaagcaagttcggaacatggta
gcattgcttttggagattggaaaagaggcagttcctgcagaggttgtctttgatgttctg
gcttcatgtgatcgcagaaccttagcaagacattgtatcattgtaccgccacaaggtctt
tgtctcatgtctgtaacttatgctactactgaccttgaaactccaccaggttctcctaca
gcatgttatggtagacaaccccagattagtaaatgcacacttgtatactattga
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