Cryptomeria japonica (Japanese cedar): 131073619
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Entry
131073619 CDS
T10556
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131073619
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
HECT type E3
131073619
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131073619
NCBI-ProteinID:
XP_057866079
LinkDB
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Position
11:complement(419179515..419190787)
Genome browser
AA seq
1743 aa
AA seq
DB search
METRSRKRGEARAAQRPSSSGAPAANKRARLEASASASPTPARRATRSSAAAARAMDDET
ASAKQRKEEIEKKGKQKESEIQRDVEIADAGQGKEILSSEYDEEGEEEEGASDDFDDDEY
DDYDDGMPEGNPGRHFGRSASELHGMLRRLAVFGLPSGGAEEVGKLKRILASLRDEADDF
SQISALTELCEILPFASEELRDRFNIDSFVPILVAFLNQEGNPDIMLLAARALTHICDIF
PSSCSSVVHHGAIPCFCARLLTIEYMDLAEQSLQALEKISHRHASACLRAGALMAVLSYL
DFFSSGVKRVALSTAANISKQLSPDTIDSAMEAIPTLTSLLSDPDAKVVEHASICLARIA
GTAALSPEKLEKLSSYGLVSQVASLISVNNSGSGQASLSSPTYSAVIGLLSTCARGSVVF
TRELLEMGISGILRDILTSSGSVSQIPSPLSLNGPTDQLCEIVSLVSDLLPSILHETISL
PTSHAGSSHSAKKLTSRSCTDNSDREKLFRENPGLLVQFGRDLFPLMIQVYGSSINTQVR
HKCLAVVSKVLCLSTADMLNSLLQATNISSFLAGVLTGKDIEVLLPALQIAEVLVQKLPE
LFSKMFMKEGVVHAVDALISSGATLSGKDKICATGTSLKTRRNRKIAGGSTSEATGMEEI
KDSNETKTSSSPALVPSANLDLKVIISAHAKRFKDAYIAANLGSTEAGSTDSLCKLTNLC
KKLSGSVSVDMKGKSKGKGKKSRFVADRNDQISSIADILAEVSKDDGVSTFEFVKSGVIA
SLIDYFAGVGTHKENTSQADLMKHHKETLRKFQSFVDLSLPLDYQGKEAPLITLIRKLQD
ALASLEHFPVVLSQGSKSHSDNPSSLAGLNAFRRPLKLRLRRAQGEKSLGDHMSSILHID
PLADITDVEDYLWSKVQRNEAEINCSVTEPIVSTHVAVEGRPSTRSRSSTATGSDSTNSI
DSLNSRSSKEKGKSVSKSVNDFDGPQTRSAARRRVALEGEPQHKQPNVQSSEEDDDPFVA
PVELEQAMALEEDGDDDVEEMFMEEPASVCVVERLAGVELRDLVGGGAMASTSAATDTVI
IQASASLKGVSSYRDHPRLNFFIGGKLIDRSSTLFHAIQHNVVPEGDEPRYAGSEYPFRE
RFWDDVHTITYRRADAPAKRNLREPQKMSSTSMTIKNMFFIDNILQRKLPCDLEKSDSTH
DILLLLRVVEGLNGLAPCLRSQSLSDAFAEGKLKSLDDLKVDVHPIPQEEFLSGKLTSKL
ARQLQDAVTLCSIGLPPWCHQLIKVCPFLFSFETRRQYFYSTALGVQRALHRLQQQQISQ
NPNVPNNRGRHVGRIQRQKVRVSRKRILESAAKVMELCCGQKTLLEVEYYNEVGTGLGPT
LEFYTLISHEMQRSMLGMWRTNLSSTGTGDTVQNGDIVQASHGLFPRPYPPHTDSSGGSK
THKVIEIFCLLGRLMAKALQDGRLLDLPLSTAFYKLVLGKELDIYDIKSFDVELGTTLIE
MQALVRRKQFLESVSGDKREEISSLHYRGARIEDLCIDFTLPGFSDYPLKPGGSNILVTI
DNLDEYVSLVVDATIKTGIMPQMEALRSGFNQVLCISTLQVFSENEMDTLLCGVRDLWVQ
AEMLTDQIKFDHGYTAQSPPILNFLEIMAEFTPSQQRAFLQFITGCPRLPPGGLSALNPK
LTVVRKSSTGPTDANSLEVVDADLPSVMTCANYLKLPPYSTKEVMRCRLLYAITEGQGSF
DLS
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcggagccggaagcggggcgaggcgagagcagcgcagcggccctcctccagc
ggcgcccctgccgcgaataagcgagctcggttggaagcgtcggcgtcggcgtcacctacg
cccgctcgccgcgccacacgatcgtccgcagcggctgcccgcgccatggatgacgaaact
gcatcggcgaagcagcgaaaggaagaaattgaaaagaaggggaagcaaaaggaaagtgaa
attcagcgcgatgttgagattgccgatgcagggcaaggtaaggaaattctgagtagcgaa
tacgatgaggagggagaagaagaggaaggagcttccgatgattttgatgacgatgaatac
gatgattatgatgatggcatgcctgaaggtaaccccggcaggcatttcggtcggtcggcg
tctgaattgcatggcatgctgaggaggctggcggtgttcgggcttccgtctggcggggcg
gaggaggtggggaagttgaagcgtatcttggctagtctgagagacgaggcggacgatttc
agccagattagcgcgctcacggagttgtgcgagattctgccttttgcttcggaggagctg
cgggacagatttaatattgattcgtttgtcccgattttggtggcgtttttgaatcaggag
ggtaatcccgatatcatgcttttggcggccagggctttgacgcatatttgcgatattttt
ccttcctcttgctcgagtgttgtgcatcatggtgctattccttgtttctgtgcgcgcttg
cttaccattgaatacatggacttggccgaacagtctttacaagctttggaaaagatatct
cacagacatgcatctgcttgcctccgtgctggtgctcttatggcagtattgtcatacctg
gactttttctcctctggtgttaagagagttgcattgtcaacggcagcaaatattagcaaa
caactttcaccagataccattgattctgcaatggaagcaattccaacgttgactagtctt
ttatcagatcctgatgctaaggtggtggagcatgcatcaatctgtttagctcgcattgca
ggaactgctgcattatctcctgagaaactagagaagctttctagctatggtctagtttca
caagttgcaagtttgatctctgttaataactcaggcagtggacaggcatcacttagttca
cctacctactcggctgtcattggacttctttcaacatgtgcaaggggctctgttgtattt
acaagggagttgcttgaaatgggtatttctggcatcctaagagacattctaaccagttct
ggctctgtttcccagattcctagtcctctttctctaaatgggccaacggaccagttgtgt
gaaattgtctccttggtgagtgatctccttccatccatacttcatgagactatctcactt
cctaccagtcatgctggttccagtcattctgccaaaaagcttacctccagaagctgtaca
gataattctgaccgtgaaaagctatttcgagaaaacccaggtcttttagtgcaatttgga
agggatctttttcctcttatgattcaggtatatggttcaagcatcaatactcaagtaaga
cacaaatgcctggcagttgttagcaaagtgttgtgtttgagcactgctgatatgttaaat
tctttacttcaagcaaccaacatatcaagctttctggcaggagttttaactggaaaagat
attgaagttttacttccagcattgcagattgcggaagttttagtgcaaaaacttcctgaa
ctgttttcaaagatgtttatgaaagaaggtgttgttcatgctgttgatgcacttatatct
tcaggggccactttgtcaggaaaggataaaatttgtgcaactggaacatcattgaaaaca
cgacgtaacagaaaaattgctgggggatcgacaagtgaagcaaccggaatggaagagatt
aaagattcaaatgagacaaaaaccagttcatctccagccttggtgccaagtgctaatttg
gatctcaaagttattatcagtgcacatgcaaagcgctttaaggatgcatacattgctgca
aatttgggttctactgaagccggatctacggatagtctttgcaagttgacaaatctatgt
aagaagttaagtggttctgtgtctgttgatatgaagggcaagtcaaaaggcaagggtaaa
aagagcaggtttgtggctgatcgtaatgatcaaatatcaagcattgctgatattctggca
gaagttagcaaagatgatggtgtgtcaacttttgagtttgttaaaagtggggttatagcg
tccttaatagattactttgcaggagtggggactcataaagaaaacacgtcacaagctgat
ttaatgaagcatcataaggaaaccttgagaaagtttcagtcatttgttgatctctcgctt
ccattggattatcaagggaaagaagctcctttgataactttaattcggaagctacaggat
gcacttgcctccttagaacattttccggtggttctgagccagggttcaaaatcacacagt
gataatcctagcagtttggctggattaaatgcattcagacggcctttgaaactgcggttg
cgtagagcacaaggagaaaagtctctgggtgatcacatgtctagtattttacatatagat
ccattggctgatatcactgatgttgaagattatctttggtctaaagtacagagaaatgaa
gctgaaatcaattgtagtgtgaccgagcctatagtgtctacccatgttgccgtggaaggc
cgaccttcaacaagatcaaggtcctcaacagcaacaggaagtgattcaaccaatagcata
gactctctaaattctagatcatcgaaagaaaaggggaaatctgtatcaaaaagtgttaat
gattttgatggcccacaaacaagaagtgctgctcggagacgagtagcattagagggagaa
ccgcaacacaagcaaccaaatgtacaatctagtgaggaggatgatgatccttttgttgct
cctgttgagcttgaacaggctatggccttggaagaagatggagatgatgatgttgaagag
atgtttatggaggaaccagcttcagtttgtgttgtggaacgattagctggtgtagaattg
agagaccttgtaggtggaggtgcaatggcttcaacaagtgctgcgacagatactgtaata
attcaggcatctgctagtttaaaaggagttagcagttatagagaccatccccgactgaat
ttcttcattggtgggaaactgatagatagatcatcaacattattccatgcaattcagcat
aatgtggtaccagagggagatgagccaagatatgcagggtcagaatatccttttcgggag
aggttttgggatgatgttcacacaattacatatcgaagggcagatgcaccagccaaacgg
aatttgagagaaccccagaaaatgagttctacttctatgactattaagaacatgtttttt
attgacaatattttgcagagaaagcttccatgcgatttagaaaagtcagatagtacacat
gatattttgctgctacttcgagttgtagaaggacttaatggtttagctccttgtttgaga
tctcagagcttatctgatgcatttgcagaaggaaaattgaaaagcctagatgatttaaaa
gttgatgtccatcccattcctcaagaggaatttttgagtggcaagttgacttcaaagtta
gcacgtcaactgcaagatgccgtgacattatgtagtattggtctgccaccttggtgtcac
cagctgatcaaggtctgtccatttttgttttcatttgagacaaggaggcaatatttttac
tctactgcattaggagtacaacgtgcactacatcgtttacagcagcaacagatttctcag
aatccgaatgtgccgaacaatcgaggacgccatgtaggtaggatacaacggcaaaaggtt
cgtgtttcacgaaaacgtatattggagtcagctgcaaaagttatggagctttgctgtggt
caaaaaacactacttgaagttgagtactacaatgaggttggcactggtttaggtccaact
cttgaattctacacccttataagtcatgaaatgcaaaggagtatgttgggcatgtggaga
acaaatttgtcttccactggaactggggatactgttcaaaatggagatattgttcaagca
tctcatggattatttcctcgtccatatccaccccatacagattcatctggtggaagcaaa
actcacaaagtgatagaaattttttgtcttctaggacgtctaatggccaaggctcttcaa
gatggccggcttctggacttgcctctttcaacagctttttataaacttgtccttggaaag
gagcttgacatatatgatattaaatcctttgatgttgaacttggaacaacactgatagaa
atgcaagcacttgttcgacggaaacaattcttggagtctgtttcaggagataagagagag
gaaatatcatctttacattatcgcggtgcacgaattgaagacctttgcattgatttcact
cttcctggtttctcggactatccccttaaaccaggagggagcaacatcttggttaccata
gacaaccttgatgaatatgtttcattagttgttgatgcaactattaagacgggaattatg
ccacagatggaggccttgcgatcgggattcaatcaggtgctttgtatatcaactttgcaa
gtgttttcagaaaatgagatggatactctcttatgtggtgtgcgtgacttatgggtgcag
gctgaaatgctcactgatcaaatcaaatttgatcatggttatacggctcaaagtcctcct
attctaaattttcttgaaatcatggcagaattcacaccatcccagcaacgagcatttttg
cagtttattactggttgtccaaggctccctccaggaggtttgagtgctttaaatccaaaa
ttgacagttgttcggaagagttctacaggacccactgatgcaaattcacttgaggttgtg
gatgctgatctaccaagtgtgatgacttgtgcaaattacctcaaacttcctccatactca
accaaggaggtaatgcgttgtaggctgttgtatgccataactgaagggcagggatctttt
gacctctcttga
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integrated database retrieval system
