Cryptomeria japonica (Japanese cedar): 131073972
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Entry
131073972 CDS
T10556
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131073972
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131073972
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
131073972
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
DExH14_plug
Helicase_C
AAA_22
AAA_19
AAA_30
DEXQc_Suv3
T2SSE
BOFC_N
BRR2_plug
Motif
Other DBs
NCBI-GeneID:
131073972
NCBI-ProteinID:
XP_057866489
LinkDB
All DBs
Position
9
Genome browser
AA seq
2125 aa
AA seq
DB search
MPLKQSPRLTTTLRVQLERKDEYFDIEQAYLQRKQFLLHNKRLKTSATLVGSSYLAQRIV
HDWDRAPIEVRKTYEEFLTVISEFLDGELSTEELHESAIIIYDILHDYKSDSNSEVALAE
KKENVHQLLGVSPSDAIIQKAASLANRLYKSQMENHVLSIDEASDLMDHRKSSEDNESEF
GFNLNFRAPSTNLNQEIAEEEEEIFLNNIAYSETDRRESNSKLSVDYSPGLNYDNKNFDL
RWLKEICDQMAMTGGSQLPGDDLAMALCHVLDSDKPGDEVAEDLFDIIGCNGFEIIQKVL
QHRKELVDMFHKGLLVLKSERTTPSLQPRMPSYGTQVSVQTESGRQILKLRRKEEKRQLK
RGSGHESEQDLLGGAGGFSALLNASEKKSGLDNLIGKGDDIFSQSGNALPQGTIRKTFKG
YEEVRVPATEAASMKPGEKLIEITSLDSFAQTAFEGYRTLNRIQSRIFPTAYNSNENILV
CAPTGAGKTNIAMIAILHEIKQHIKNGILHKNEFKIVYVAPMKALAAEVTTAFSRRLSPL
NITVKELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSVLVKLLIIDEVHLLND
ERGPVIEALVARTLRQVESLQSMIRIVGLSATLPNYLDVAQFLRVNPDTGLFFFDSTYRP
VPLTQQYIGVNEHNFSARNNLMNEICYNKVLDALKHDHQAMVFVHSRKDTGKTARILVEI
AQRNDELGYFSNETHPQYGIRKTEVFRSKNRELGELFQSGFGIHHAGMLRADRSLTERLF
SEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRELDILDVMQIFGRAGRPQF
DKSGEGIIITTHDKLARYLRLLTNQLPIESQLISSLKDNLNAEIALGTVTNVREACAWLG
YTYFFIRMRANPLAYGMVWEEVVADPSLTSKQRAFIADAARALDKAKMIRFDEKSGNFYG
TELGRIASHFYIKYTSVETYNEMLKQHMNESELINLVAHSSEFENIMVREEELFELETLC
RSSCPLYVRGGPEDKYGKISILIQVYISRASLESFSLVADANYISQSIGRIMRALFEICL
RRGWCAMAVLLLQYCKAVDRQIWPHQHPLRQFERDLSLEILRKLEDKDVQLNHLSELEEK
EIGALIRYFPAGKMIKKCLASFPCIHLSANISPITRSVLQVELIITPDFVWKDHLHGAAQ
RWWILVEDSENDHIYYSELFILSKKMARVGQQKLTFTVPIFEPWPPQYYIRGISDIWLQA
DVFHTVSFQQLILPELHTPHTELLDLRPLPVTALGNRNYEELYKFSHFNPIQTQAFHILY
HTDKNVLLGAPTGSGKTISAELAMLHLFNTQPDMKVIYIAPMKAIVRERMNDWQKGLVLS
LKKKMVEMTGDFTPDLKALLSADIIVSTPEKWDGISRSWHHRKYVMKVGLLILDEIHLLG
ADRGPILEVIVSRMRYISSQTARPIRFVGLSTALANARDLADWLGIDDAGLFNFKPSVRP
VPLEVHIQGYPGKFYCPRMNSMNKPAYAAIATHSPSKPVLVFVSSRRQTRLTALDLIQFA
AADDRPKQFLNFPEEEVEMLVAQVTDINLRHTLQFGIGLHHAGLNDRDRSLVEELFSNNK
IQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQNG
KAVILVHEPKKSFYKKFLYEPFPVESSLKDQLHNHINAEIVAGTISQKKDAVLYLTWTYL
YRRLVMNPSYYDLENTESSTVNAYLSRLVTDTLQDLEDAGCVEVDEDNFVKPLMLGTVAC
QYYLSYKTVSLFITNIGSDTSLKTLFHVLCGASEYDELPVRHNEEHINEVLSKEVEYEVD
KYSLDDPHVKTNLLLQAHFSRLELPISDYVTDLKSVLDQSIRIIQAMIDVSANSGWLMSA
LNSMHLLQMVIQGLWFKKESSLWMLPSMTNDLMDVLRQEGITELQQLLELSKPSLGKNKI
TELQQLLQSILTKPELAEFFRVLGQFPRIQVDWNLEKRERSGEQYSYILEIKLKRMKKGS
RAFAPRFPKIKEEAWWLVLGNIETNELYSLKRVSFSQDLITSMIISPDQVNNEGTKLFLV
SDCYLGFEQEYALGSTNRNGHMAVQ
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttaagcagtcacctcgcctgaccaccacgctgagggtgcaattggaaaggaag
gatgagtattttgacattgagcaggcgtatctccagcgaaaacagttcctgcttcacaat
aagcgcctcaaaacgtcagcaacattggttggcagttcttatctggctcaaagaattgtt
catgactgggatagagcaccaattgaagttcggaagacatatgaggaatttctcactgtt
atctcagaattcctggatggtgaattatcgacagaagagctgcatgaatcagctataatt
atttatgacattcttcatgattacaaatctgattctaatagtgaggtggctctagcggaa
aaaaaggaaaatgtgcatcagttattgggcgttagtccttcagatgctattatccagaaa
gctgcttcgttagctaatagactgtacaaatcacagatggagaatcatgtgctgtctatt
gatgaggcaagtgatctaatggatcaccgaaagagtagtgaagataatgagtcagaattt
gggtttaatctgaattttagagcaccatctaccaatcttaaccaggagattgcagaggaa
gaagaagaaatctttttgaataatatagcatattcagaaacagataggagggaatcaaat
tccaaactatctgtggattatagcccagggttaaattatgataacaaaaattttgatttg
agatggctcaaagaaatatgtgatcaaatggctatgacagggggatcacaattacctgga
gatgatctggctatggccttatgtcatgtactggattccgataaaccaggagatgaggta
gctgaagacttgtttgatataattggatgcaatggatttgagataatccaaaaagtgtta
cagcaccggaaggagctcgttgatatgttccataagggattgttggtattaaaatcagag
aggacaactccaagtttacaaccccggatgcctagctatgggacacaggttagtgttcaa
acagaatctggacgccagatcttgaaactacgacggaaggaagaaaagcggcagctgaaa
cgtggatctggccatgaatcggagcaagatttgctaggtggagcaggaggtttttcagca
ttgcttaatgcaagtgagaagaaatcaggactggataatctgattggaaagggggatgat
atattttcacagtcaggaaatgctctcccacaaggaactatacgcaagacttttaaaggt
tatgaagaagtaagggtccctgccactgaggcggcttcaatgaagcctggggaaaaattg
attgaaattacaagcttggattcttttgcgcaaactgcctttgagggatacagaacactg
aaccgtattcaaagtagaatattcccaactgcatacaacagcaacgaaaatatacttgtt
tgtgctcctactggagctggtaagacaaatattgccatgatcgctattttgcatgagatt
aagcagcatataaagaatggaattttgcataagaatgaattcaaaattgtttatgttgca
cccatgaaggcattggcggcagaggtaacaacagcctttagccgccgcttatctccctta
aatataactgtaaaagaacttacaggagatatgcagctgagtaaaaatgagcttgaagaa
acacagatgattgtgacaacacctgagaaatgggatgtgatcacacgcaagagcagtgac
atgtcactatcagttcttgttaaacttttaattattgatgaagtgcatctcttgaatgat
gaaagaggcccggttatagaagctttagttgctagaactcttcgtcaggttgagtcgttg
caaagcatgataaggattgtgggtctctcggctacccttccaaattatttggatgttgca
cagtttttaagggtcaatccagacacaggattattcttttttgattctacttaccgtcca
gttccacttacacaacaatatataggtgttaatgaacataacttctctgctcgtaacaat
cttatgaatgaaatctgttataataaggttttggatgcactgaaacatgatcaccaagca
atggtttttgttcattcgcgcaaagacactgggaaaactgcacgaattctggtggaaatt
gcgcaaaggaatgatgaacttggttacttttcaaatgaaacacatcctcaatatgggatt
aggaagacagaggtatttagatcaaagaatagggaacttggggaattgttccaatctggt
tttggaatccatcatgctgggatgcttcgtgcagaccggagtcttactgagcgtctcttt
tctgaaggactgctaaaggtccttgtctgtacagcaacattagcatggggtgtcaatctt
ccagctcataccgttgtcataaagggaacacaattgtatgatccgaaggctggaggatgg
cgagaacttgatatacttgatgttatgcagatatttggtcgtgctggacgaccacaattt
gataaaagtggtgaagggatcatcatcaccacacatgataaattagctcgttatttgcga
ttacttacaaatcagttgccaattgagagtcagcttatcagctccttgaaggacaatttg
aatgcagaaatagcactcggcacagtgacaaatgttcgagaggcttgtgcttggcttgga
tatacatactttttcatcagaatgagagctaatcctcttgcatatgggatggtatgggaa
gaggttgttgcagatccttcattaacttcaaaacagagggcatttattgcagatgctgct
cgtgctttggacaaagcaaaaatgattagatttgatgagaagagtggcaatttttatggc
acagaactgggtcgtatagctagccacttctacattaaatacacaagtgttgagacttat
aatgagatgttaaaacaacatatgaatgagagtgagcttataaaccttgtggctcattca
tctgagtttgagaatatcatggttagagaagaggagctttttgaacttgaaacattatgt
cgcagttcatgccccttgtatgtgcgtggaggccctgaagacaaatatgggaaaatttct
attttgatacaggtctatatatctcgtgcttcacttgaaagtttttcattagttgcggac
gcaaactatataagtcagagcattgggcggattatgcgagcattatttgaaatttgtctg
cgtcgtggttggtgtgctatggctgttcttttattacagtattgcaaagctgttgatcgc
caaatttggcctcatcaacatcctcttcggcagtttgagagggatctctcattagagata
ttaagaaaacttgaagataaggatgttcagttaaatcacctttctgaactagaagagaaa
gagattggggctctcattcggtactttcctgctggaaagatgattaagaagtgtttggca
agctttccttgtattcatttatctgctaatataagtccaatcacacggagcgttctacag
gttgagctaataataactccagactttgtctggaaagatcatctgcatggagctgctcag
cgctggtggatcttagttgaggattcggagaatgatcacatctattattcggaactgttc
attttgtcaaaaaagatggcaagagttggtcaacaaaaacttacattcacagtacctata
tttgagccttggcctccacagtactacatacggggaatttcagacatctggctgcaggca
gatgtctttcatactgtctccttccagcaactgattttaccagagttacatactccacac
actgaacttcttgatttgaggcctcttcctgttactgctcttggcaaccgtaactatgag
gaactttacaagttttcacatttcaatccaattcaaacccaggcatttcatattctgtac
cacacagacaagaatgtccttctaggtgcaccaacaggaagtggaaaaacgatatctgca
gaacttgccatgctccatcttttcaatactcaaccagacatgaaggttatttatattgca
ccaatgaaggccattgtcagagaaagaatgaatgattggcagaaagggcttgtactgagt
ttgaagaaaaagatggttgagatgactggagactttactccagatctcaaggcacttctt
tcagcagatataattgtttcaactccagaaaaatgggacggcatcagccgtagttggcat
catcgcaaatatgtgatgaaggttggactcttgatattagatgaaattcatttacttgga
gctgaccgtggacctattcttgaggttattgtttcccggatgagatatatttcttcacaa
acagcacgtccaattcgctttgtaggcttgtcaactgcattagcaaatgctcgtgacttg
gctgactggctgggtattgatgatgctgggcttttcaacttcaagccaagtgtgagacca
gtaccgcttgaagttcacattcagggatatcctggaaaattctactgcccacggatgaat
agcatgaacaaacctgcctatgctgctatagcaactcattcgccatccaaacctgtactt
gtatttgtttcctcccgtcgtcaaactcggcttacagctcttgacctgattcagtttgca
gctgctgatgacaggccaaaacaattccttaattttcctgaagaagaagtcgaaatgcta
gttgcacaggttacagatataaatttaagacatacactgcaatttggtataggtttgcac
catgctggtttaaatgatcgtgacaggtcattggttgaagaattgttctcaaacaacaaa
attcaggtgcttgtctgcacaagcacattagcatggggtgtaaacctgccagcacacctt
gtaataatcaagggaacagaatactatgatggcaaagcaaaaagatatgttgattttcct
atcacagacatcttacagatgatgggtcgggcagggcgcccacaatatgatcagaatggg
aaggcagttatacttgtgcatgaacccaagaaaagcttttacaaaaagttcttgtacgaa
ccatttcctgttgaaagtagtctcaaggaccagctgcataaccacatcaatgcagaaatt
gttgctggaactatttctcaaaagaaggatgctgttctttacctcacttggacttatttg
tatcggcgcttggtaatgaatcctagctactacgatttggagaatactgagagcagcact
gtaaatgcttacttgtcgaggctagtaacagatacccttcaagacttggaagatgctggt
tgtgtagaggtggatgaagataactttgtcaagcctcttatgttgggcactgttgcttgt
cagtactatcttagctacaaaactgtgtcactctttataacgaatattggttctgacact
tctcttaagacattattccatgtactctgtggtgcttcagaatatgatgaacttcctgtc
cgccataatgaggaacatattaatgaagtattgtcaaaagaggtggagtatgaagttgat
aagtacagtttggatgatccacatgtaaaaaccaatttgctgcttcaggctcatttctca
cggctggagttgccaatcagtgactatgtcactgacttaaaatctgttttggaccaaagt
atacgaatcattcaggctatgattgatgtatctgccaatagtggatggcttatgagtgcc
ctaaattccatgcatcttttgcaaatggttatacagggcttatggtttaaaaaggagtcc
tcattgtggatgttaccaagcatgacaaatgatctgatggatgttctgcggcaggaagga
attacagaattgcagcagttgttggagctctcaaaaccttctctagggaagaataagata
acagaattgcagcaattactgcagtcaattcttaccaaacctgaattggcagaattcttc
cgagttttgggacagtttcctcgaattcaagtggattggaatcttgaaaagcgagaaaga
agtggtgaacaatattcatatattctcgaaattaaattaaaaagaatgaaaaagggatca
agagcttttgctcctcgatttccaaagataaaagaggaagcatggtggttagttcttggt
aatatagaaacaaatgagctatattccttaaagagagtaagcttttctcaggatctaatt
actagtatgatcatatcacctgatcaagttaacaatgagggaacaaagttatttctggtt
tcagattgctacctgggtttcgaacaggagtatgctcttggaagcacaaatcgtaatggt
cacatggctgtgcaatag
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integrated database retrieval system
