Cryptomeria japonica (Japanese cedar): 131074382
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Entry
131074382 CDS
T10556
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjf03036
]
131074382
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
131074382
Condensin II
131074382
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
SMC_hinge
AAA_23
AAA
AAA_29
AAA_5
Spectrin_Anc-1
PqqF_C_3
AAA_16
Motif
Other DBs
NCBI-GeneID:
131074382
NCBI-ProteinID:
XP_057866980
LinkDB
All DBs
Position
3:238898627..238919505
Genome browser
AA seq
1208 aa
AA seq
DB search
MRPTEEAVAEPQAKQRVLVHSITAKAFKSFNAKVRIEPLTCFTCIVGPNGTGKSAIGEAL
AFALGASPKFLRANASSSLVNNRSSDSSTKFRGRCPIQVSVKLERSDDGAKFKVQRVFRG
NSSKYYWKDDIRTSKREITLSELKEKLASLNVPVNNLDRFIVMQNRVAAKVKEPQELTKH
LELVIGTSHYEEKIKEADQEIVKQTSGLDCMQESLSEIELKRKQLNPEVEKWNMFTKKWH
QFSERKALFLRNQERSLRARLQICRDRKDNGIQELSQIQSKLNSLQGLLTNLNLERTRLK
VVLQDCQKKHKSAQRQYDLQRTKMIKEEVQLKEAEKEAALQKDHYQKEEKSLQTRQKDIQ
NELDLLSKNVDELESKKHKICQDKEETEKKKFSLLSPEDNVLQTDNLTNQEEVLLTMKIT
RLQERLNISTEKSRYNISRASQLTVEMEITKQELEEALKFEEDQERMLSVTKNRLSLLHE
EIDLLGGQKIPRLREEISNNEVEIKRLIKKLHDIQNQPNKLSKEDEAAKVLAQKLKGKLH
GRITDLATVSNHLARAANSILCHLTNPATTFVVDDRDTANMVISYFQEKHIGIATCEILS
ELSRQFKCLNPCEIGSYARPILQDLQCSENYQPIFQKYFGSWCAAKDLCAATSYFKRKQS
YSETYNIVTEDGDIFKKDGEVISANQGLRGRVAFKTINDISNQNESNNILIWEEALKMKI
KLKDELEASLTMQLTKLEVFKSREREFSDQIQKIEESIKFCKNSNAASVRKKLEKQQIEL
HNIQKTIKDVCDDGKLQKEIEELEQKRKNLKAKLKASEKNLSCNPQLIEVNERIRRLGDE
IKSCTGEIRKKISSIKVLKNQLEALKSRDKFMLSLSEKLSALESQRENFLHIKEQVRQAE
FEKSSRKSDMEKAETNIAAIETEIAEHGKEERKLRLIEVCKKNELNELIASETTTEEQLG
KVLFALRDGCDPQFHKRVCHEPSSPSSLQALASEAEDEEGLILAQEEMSLNEIRRSICAD
VLEEDVKYRKNESYFLKELNQLSRLIESNRNHKENLENERFHVFRESVKKLNSTLSNIYR
SLTQHGDAYLSFTDEKCLLFCDGVNLQVRPDRHKWRNFNFLSGGQQALASLALSFSLQTM
FPSPFYFFDEIDAALDTKNAQLVAEYIKNQTSAQYIVVSHRPQLYELATSLVGIYHYSGA
STSITVNI
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgagacccacagaagaagcagtagcggaacctcaagctaagcagcgtgttttggtacac
tcaatcacagcaaaagctttcaagtctttcaacgccaaagtgagaatcgaacccctaacc
tgcttcacctgcattgttggaccaaacggcacaggcaagagcgcaattggcgaagcccta
gcatttgcgttgggagcatccccaaaatttctcagagccaatgcctcttcgtcactcgtc
aataatcgatcttcagactcatctactaagtttagaggtagatgcccaatccaggtctct
gtgaagctagaaagaagcgatgatggcgctaagttcaaggtgcaaagggtttttagagga
aattcctcaaaatattactggaaagacgatattcggacctctaagagagaaattacgctg
agcgagctgaaggagaaacttgcaagtttaaatgttcccgtgaataacctggatagattc
atagtgatgcagaatcgagtggctgctaaggttaaagagcctcaagaactgaccaagcat
cttgaacttgtgattggaaccagccactatgaagagaagattaaagaggctgaccaggaa
attgtcaaacaaacttctgggttggactgtatgcaagagagtttgagtgagatagaattg
aagaggaaacagctcaaccctgaggttgaaaaatggaatatgtttacaaaaaaatggcat
caattttctgagaggaaggcactgtttctcagaaaccaagagagatctctacgtgcgaga
ttgcaaatatgtagagaccggaaggacaatgggatacaagaactcagtcaaattcaaagc
aaactcaattctttgcaagggttgttgacaaatttgaatcttgagcgcacacgattaaaa
gtggtcctgcaagattgccagaagaaacacaaaagtgcccaaaggcaatatgatttgcag
aggaccaaaatgatcaaagaagaggttcagttaaaagaagctgaaaaggaggctgctctg
cagaaagatcattatcagaaggaagagaagtctcttcagacacgtcagaaagatatccaa
aatgagttggatttgctttctaagaatgttgatgagcttgaaagcaagaaacacaagatt
tgtcaggataaggaagagacagagaagaaaaaattctctcttttaagtccggaagataat
gtcttgcaaacagataatttgaccaaccaagaagaagttctgcttaccatgaagataact
agactgcaggaaagactaaacatatcaaccgaaaagagcagatacaacatttcacgagcc
tcacagttaacagtggagatggaaattacaaagcaggaactggaggaagcgcttaaattt
gaagaagaccaagaaagaatgttgtcagtcacaaagaatagattgtctctgttgcatgaa
gaaattgatttgttaggtgggcagaagatacctaggctgagagaagagattagcaacaat
gaagtggaaattaagcgtttgataaagaagttacacgacattcaaaaccagccaaataag
ttgtcaaaagaagatgaagcagcaaaggttcttgcccaaaagttgaaaggaaaactacat
ggaaggatcacagatttagctacagtcagtaaccatttagcaagagcagcaaactccatt
ctatgtcatcttacaaatccagcaactacatttgtagttgatgacagagacacagcaaac
atggttatctcatattttcaggaaaaacacattgggattgcaacatgtgagatactgtct
gagttaagtcggcaatttaagtgcttgaatccttgtgaaattggatcatatgctaggcca
attttgcaagatctccagtgttcagaaaactatcaacctatcttccaaaaatattttggg
agttggtgtgcagcaaaagatctttgtgctgcaacttcatactttaagaggaagcaaagt
tactctgagacatataatattgtaacagaggatggggacatcttcaaaaaggatggtgaa
gtgatttctgcaaaccagggcctcagagggagagtagcatttaaaactatcaatgatatc
tctaaccaaaatgaatcaaacaacatcttgatatgggaggaggccctaaaaatgaagatt
aaactgaaagatgaattggaggcaagcctaacaatgcagctaaccaaattggaagtattt
aaatctcgagagcgagaattttctgaccaaattcagaaaatagaggaaagtataaagttt
tgtaagaattctaatgcagcatctgtcagaaagaagctcgaaaagcagcaaattgaacta
cataatattcagaagacaattaaagatgtttgtgatgatggcaaacttcaaaaggaaatt
gaagaattagaacagaagcgaaagaatctaaaagccaaactgaaagcatctgaaaaaaat
ttatcatgtaatcctcaactgatcgaagtaaatgaaagaattaggcggctaggggatgaa
attaaatcatgtactggtgagatcaggaagaaaatatcttctattaaggtattaaaaaat
cagttagaagcattaaaatctagagataagtttatgttatcactttcagaaaagctatca
gcccttgaatcacaaagagagaattttctacacataaaggagcaagttcgacaagcagaa
tttgagaagtcttcaagaaaatcagatatggaaaaagcagaaacgaacattgctgccatt
gaaacagagattgcggagcatgggaaagaagagaggaaactgaggttaatagaggtttgc
aaaaagaatgaattgaatgaattgatagcatctgaaacgacaacagaggaacaactagga
aaagtcctttttgcattgagagatggttgtgatccccaattccacaaaagagtatgtcat
gaaccttctagtccatcttctttgcaagcacttgcaagtgaagctgaagatgaagaaggc
ttgatcttagcccaagaggagatgtccttgaatgaaatcagaaggagcatttgtgcagat
gtcctggaagaagatgtcaaatacagaaagaacgaatcttacttcttgaaagaactcaat
cagctaagtcggttgattgagtcaaaccgaaatcacaaggaaaatctagaaaatgagagg
tttcatgtttttcgagaatctgtcaagaagctgaacagcacactgtcaaatatatatcga
agtcttacccaacatggagatgcatatctctctttcacagatgaaaagtgtctcctgttc
tgtgatggagtgaatctacaagtccgtccagatagacataagtggcgcaatttcaacttt
ctatctggtggacaacaagccctagcatctttagccctgtccttcagcttacaaacaatg
tttccttcaccattctatttctttgatgagattgatgctgctctcgatacaaaaaatgcc
cagcttgttgcagaatatataaagaatcaaacatctgctcaatacattgtggtttcacat
cgacctcagctatatgagcttgccacatctttggtagggatttatcattacagtggtgcc
tctacatctataacagtcaacatttaa
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