Cryptomeria japonica (Japanese cedar): 131074886
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Entry
131074886 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131074886 isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131074886
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131074886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_GCN1
HEAT_EF3_N
RTP1_C1
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
131074886
NCBI-ProteinID:
XP_057867598
LinkDB
All DBs
Position
1:complement(556728941..556867571)
Genome browser
AA seq
2850 aa
AA seq
DB search
MEQSVKGLNKGPGGRRFVFKSFAQRLEEVDVDVFRSLEPVKFEPTQGSSFFHENLVRWRE
LNSAADFISLYEELMPVVQTLPQLLLHKEMILAKLLSRVHMQARLSLEPILSLIAILSRD
LRAEFMPFLSQIIESFVSLLRSGGDRDPEIIEQVFTSISYVMKYMQKLLVKDVSHVINIT
KQLRCYHREYVQEFTAEAVSFLLRNSSVKQLIKGIQKVIGEVAIKPSKEKTTGCSALLWH
TLKGPASRFHSRAEQVLRLLLDKLTYSKAIKKGHGVNMIIEVVMGTFQRLCGELNREDLR
LLWDCLLEETSCLLHNSCVEGVNDVDPESLHHLPTKEPLADTIMEEQDNVSSRHALMGVG
DIKKKEDFIHLSRVLSLLNVILEFQNGSKVNDYKQLFALAGELVKLLISSLWTPISREDS
IQSVASETCRFLLALVHNHARVGGVSVGPIAIINVSVQWAPVFQGKDDWLLPFIRGLLDE
DLSVMYPFSPYIISALDNYIEASPADVISLLVKYVDKIQTNPQYLSNLGGKDGKITRNIC
SFLIRVIETAAEKMNARKVDKEDLDLNSLLPEAPNTWGALKCYPYFFSSEDNASLLWEYA
LAIDKFLIAETENVKDHSRKLWESMIGSTLRSHLKLLRANTPILSKHMCDYINFARRYRL
SPHVLSAVADFLDAVLGSTECINNKDKKYHLELRIDKTANALILFTGNLGMPDKNLRLST
LRLLSHYEPFCVPKSEIVERPDKRRKIEGVKTNDEASDSCSNVIQQILSIETTPMSLVTS
RQATVLISKIQIDLCAGRIPDLYISILFHGLIGVLHNRFGLLWDPVVECIVVLLERHQKL
IWDDFVHYLGRSQALFLALPEGELNLKSNVFGGLKDLDDQFRHFIHHGSECTAVDMVVSL
LMHVAQKVPKLAETRSRQIIPLFLSFLGYFNQDIASVNDYDENKCKGKQWKNILKEWLIL
IQKMRNSKSFFKGHFLKEILINRLLEQNDPDVQLKVLQCLMNWKDGFLLPYEEHLKNLIS
LKEAREEVTTWSLSKERQQIQDCHRGELIPIVIRLLISKVKKIKAISSKKSAGALQRKAV
LCFLANLEVNELALFFSLLVKSFQSAFMKEHVSIYGSKYSWEVAIEQGATWDFVQWISTE
SVASIPYKNKSGFLHVVKDVLETFSEEQVTPYLVPLLALILHILQSCAQSLEHQKESTFG
CNIEQGSEAFAESKMTDVIMLDDAHNTHATREANQLSVVVSDDTLGKLDATSVLSTSASS
ETQITSVMASEGKKVKPSSSLFDMKDLRSLCLKVIAIMLNKYDSFDFGSVFWDIFFTAIK
PLVDKFRQESGSSETPSSLFTCFLAMSESRKLASFLQREKMLVPNILAILSVKGVSESMI
SAVLTFVENLLDLDDINNEDQDKALLEEILLPHLDILFTSMQNLIQLRHKKRSRKNTTGL
GKRVLRLFQSLGKYVTNSEAVNQFIDGLLPFLDVKKDRNDEHYIEILSVVKAVLPALEDG
ISLKMLNTFSSLLTSATLDVRLAICDILRRLAEKDSSLAFVAELVWELNAMSPDMIGEYD
CDKRLFAYEKIASKKFTHIGEPCALLILSHCVYDLSSQELSLRDSASACLLSFIEFSGTV
LGSKEDVQQNENQDDQSDKKNNHGKDGSGTIIPCMIENKNNWSKISVKRVIYRFFLLHLR
NSMTTSETAIQREWMVILRAMVTNLSDITTLNELKPLSSTDLEVDFFSNILHIQKHRRAK
AMTRLRNLVDARNLSEEILMQIFVPLLFNMLLESKSDKEGHVISSCIETLACISGRIRWE
SYFSLLMRSFRLMASKHETNKRLVRLICSLLDSFCFVERNSSYIDLDKQDHQTEHKEIVR
DERIMDLSNSCDKDIVISPQIQERLQKSILPEMNKIMISNSDVVNVSVSLAAVKLLKLMP
KGTMESELPRIIQQIANLLKSRADSVRDEARTALAACAKELGPQYLQLIIKALRTTLKRG
YELHVLGYTMNFILSKFQSSLDIGDIDYCLQGLLEIAENDIMGEVAQEKEVEKIASKMKE
TKNSKSYESLQLISQNITFHRRASALLKPVEHNLHKTLAPKEKVKVESMLRYIAAGLQSN
ISLGPQDLLVFVYGLVEDGLQDEKIGRRTDFITSPEMESSRSTNSSNNLMKGTVDDIDAP
NRYVITVFALRLLEHHLKHIKADKNDHHIISMLDPFLELLHQCLKSKYEGVISQSVKCLA
LLLRFHLPSIDILGGNITSLVFDMVQRSGKIHSPLMQSSINLLIVLLRYANTTMSDVQLK
MLLQSPVFIDLESSSNTIALSLLKAIIGRKLMVPDLYDLITRVAHLMVTSQIQPIRKQCS
QILLKFLLDYPLGEKRLQQHIDFLVANLSYEHTCGREAVLEMLHVIIQKFPSNVVDEQAE
TFFLPLVARLVNDNDKGIRAMVGYVLKELIGRVSQRPLQRMLTFGLLWYKGEKKQLWCPA
AQVLGLLIEVMKKSFQAHVEDVRSRAIDILKCAVAAASNEKSEAADIEMLAFWQEAYYSL
IMLEKLLHQSPEISLHKDFEEIWDLICSLLVHPHVWLQNISGRLIAIYFSTCGSEVVTKS
QANGKTAMLLQPSRLLLLAASFCHQLDMDMDLLDNCMGDMSMVVENLVYVTCALYSFVKS
RPQVDLKDFFSTLDAHNQSLIMEALALLGSKTCTKVCACLLSREKKDVSELEDKNEFQDL
ETSLYEPIFKKMGKIARQAKDLQTKAVFKWYKAISTHQGHEGIQRYGSTILLPLYKIIEG
YAGNVVSGNLKLLAEEVLNHMKDIMGVEGFVQAYNLVRQKVKATHSKRKQTEKVSALVNP
IRHAQKKRKLAVKRQAQKKRKVMKTRMQRS
NT seq
8553 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatctgtcaagggacttaacaaagggcctggtgggaggcgctttgtgttcaag
agctttgctcagcgccttgaagaggtcgatgtcgatgtatttcgaagtctagagcctgtg
aagttcgagccaactcagggatcatcatttttccatgaaaaccttgtccgatggcgggaa
ctgaatagtgcagcagattttatctctctttacgaggaattaatgccagtggtacagaca
ttacctcaacttttgcttcacaaggaaatgattctagcaaaacttctttctcgggttcat
atgcaggcgaggctgtcccttgaacctatcctcagtttgattgcaattctttcaagggat
ttgcgagcggaatttatgccttttctatctcaaatcatagaatcattcgtaagccttctt
agatctggtggagacagagatcctgaaataattgaacaggttttcacatctatatcatat
gtcatgaagtacatgcaaaagcttctcgtgaaggatgtttcccatgtgattaacataaca
aaacagctgcggtgctaccaccgagaatatgtccaggagttcactgcagaggcagtgtca
tttttgctgcgaaattcatcggttaagcagcttattaaaggtattcagaaagtcataggg
gaagttgctatcaagccttcaaaggagaaaacaacaggatgtagtgcgttgctgtggcac
acattgaagggtccagcttcaaggtttcattccagagctgagcaagttcttcgccttctc
ttggataaattgacttactctaaagcaatcaagaaaggccatggtgtcaatatgattata
gaggtggtgatgggaacttttcaacgattgtgtggggagcttaaccgtgaagatttgaga
ttgctttgggattgtttgcttgaagagacatcttgcttgctacataactcctgtgttgaa
ggtgtaaatgatgtagatccagagtctttgcatcatctcccaacaaaggaacctctagca
gatacaataatggaagaacaggacaatgtgtcttctagacatgcactaatgggcgtggga
gacatcaaaaagaaagaagactttatacatcttagtcgtgtcctatcattacttaatgtg
atacttgaatttcagaatggaagcaaagttaatgattataagcagttgtttgcacttgct
ggtgaactagtcaagttattgattagctcgctatggacaccaatatcaagggaggattct
attcaatcagttgcctcagagacatgtaggtttttgcttgctcttgtgcataatcatgca
cgtgtcggtggtgtaagtgtaggtccaatagccataataaatgtatctgtacaatgggct
cctgtgtttcaagggaaagatgactggctattgccttttataagaggtttgcttgatgaa
gatttaagtgtgatgtatcctttcagcccttatattatcagtgccttggataattacatt
gaagcatcgcctgcggatgtcatttctttactggtgaaatatgttgataaaatacaaaca
aatccccagtatttgtctaatcttggtggaaaagatggaaaaattacaagaaatatctgt
tcatttctgatacgagtcattgagactgcagcagaaaaaatgaatgccagaaaggttgat
aaagaggatctggaccttaattctttattgccagaagcacctaatacctggggagcactt
aagtgctatccgtacttcttttcttcagaggacaatgcatcattactgtgggaatatgct
ttggctatagacaagtttttgatagctgaaacagaaaatgtcaaagatcattcaaggaaa
ctgtgggagtctatgataggatctacgttaagatctcacttgaagttactgagagctaac
actcccattctgtcaaagcacatgtgtgactacataaactttgcaagacgttacaggtta
tcacctcatgttttaagtgcagtagctgacttcttggatgctgttcttgggtcaacagaa
tgcatcaataacaaagataagaaataccatttagagcttagaattgataaaactgcaaat
gctttgattctattcactggtaatttgggaatgccagacaagaacttgaggctttcaact
ttaagacttttaagccactatgaaccattttgtgtcccaaaatctgagattgtagaaaga
ccagacaagcgaaggaagattgaaggagttaaaaccaatgatgaggcttccgattcttgc
agcaatgttatccagcagattctttccattgaaacaacccctatgtcccttgttacaagc
aggcaggcaacagttcttatctcaaaaattcagattgatctctgtgcaggaaggatccca
gatttatatattagtattctattccatggtctgattggtgtacttcataatcggtttgga
cttttgtgggaccctgtagtagaatgcattgtggttctgttagagaggcatcaaaaactc
atatgggatgattttgtgcattatctcggaagaagccaagcattgttccttgcattgcct
gagggtgaactgaatctcaagtctaatgtttttgggggattaaaagatttggatgatcag
tttagacatttcatacatcatggttcagaatgcactgctgtggatatggttgtgagtcta
ttgatgcacgttgctcaaaaagtaccaaagctggcagagacgaggtctcgccaaattata
cctctgtttttatcattccttggttactttaaccaggatattgcaagtgttaatgattat
gatgagaataaatgtaagggcaaacagtggaaaaacattctcaaagaatggctgattttg
atccagaaaatgagaaattcaaagtcattctttaaaggtcattttctgaaggaaattttg
atcaataggcttttagagcaaaatgatcctgatgtgcagcttaaagtccttcagtgcctt
atgaactggaaggatggttttcttcttccttatgaagaacatctgaagaatttaatttct
ttgaaggaagcacgggaagaagtaaccacatggagcctatctaaagaaaggcaacaaatt
caggattgtcataggggagaattgatccccatagttatacggttgttaatatcaaaagtc
aaaaagatcaaggcaatctcttcaaagaagtctgcaggtgctcttcaaaggaaggcagtt
ctttgttttttagcaaatcttgaagtgaacgagttggcattatttttcagtttgcttgtg
aagtctttccagagtgcattcatgaaagagcatgtttcaatctatggctcaaaatattct
tgggaagttgctattgagcaaggtgcaacatgggattttgttcaatggatcagcacagaa
agtgtagcttctattccatataaaaataagtcagggtttttgcacgtagtaaaggatgtt
ttagagacattcagtgaagaacaggttaccccataccttgttccgttgttagcattaatt
cttcatatattgcaatcctgtgcacaaagtcttgaacatcagaaagaaagcaccttcggt
tgcaatattgaacaaggtagtgaggcttttgctgaatctaagatgactgatgtgataatg
ttggatgatgcacataatacacatgcaactcgggaagcaaatcaacttagtgttgtggtt
tcagatgatacattggggaagctggatgctacatcagtgttatcaacttcagcttctagt
gagacccaaattacaagtgtcatggcttctgaagggaaaaaagtgaaaccgtcatcatct
ctttttgatatgaaagacttgagatctttgtgtctcaaggtcattgctattatgcttaat
aagtatgattcattcgattttggttcagtattttgggatatattttttacagcaatcaag
cccttggttgataaatttaggcaagaaagtggcagcagtgaaacacccagctcattgttt
acttgttttctggcaatgagtgaaagccgaaagctagcttcatttcttcagagagaaaaa
atgcttgttcctaatattctggcaatcctgtctgttaaaggtgtgtcagagtccatgata
tcagctgttctgacttttgttgagaatcttctggatttggatgatataaataatgaagat
caagataaggccttgctagaagaaattcttttgcctcaccttgatattcttttcacaagt
atgcagaatctcatacagcttcgacataagaagagaagcaggaaaaacaccactggtctt
ggtaagagagtgctcagattatttcaatcattgggaaaatatgtgacaaattcggaagca
gtgaatcaattcattgatggtttattaccattccttgatgtcaagaaagatagaaacgat
gagcattatatcgaaatactttctgttgtgaaagcggttttgccagcactggaagatgga
atttcccttaaaatgcttaataccttcagttcattgcttacttcggctacattggatgtt
cgattggccatttgtgatattctcagaaggctggcagaaaaggattcttccttggccttc
gtggcagaattggtatgggaattaaatgcaatgtcaccagatatgattggagaatatgat
tgtgataaaaggctatttgcatatgagaaaatagcctctaaaaaatttacccatattggc
gagccatgcgccttgcttattctctcacattgtgtgtatgatttgtcttcacaagagctt
tctctcagggatagtgcctctgcatgtcttctttcttttattgagttttctggtacagtt
ttgggaagtaaagaggatgtgcagcagaatgagaaccaagacgaccaaagtgataagaaa
aacaaccatggaaaggatgggtcaggaactattattccttgcatgatagagaacaagaac
aactggagtaaaatatctgttaaacgtgtaatctatagattttttctcttacatttaagg
aattctatgacaacttcagagacagccatccaaagggaatggatggttatactgcgtgca
atggtgaccaacttatctgatattacaactctgaatgaattgaagcctctttccagcaca
gatttagaagttgacttcttcagtaacattcttcacattcagaagcacaggagagcaaaa
gcaatgacacgtcttaggaatctcgtggatgctagaaatctatctgaggaaattctcatg
caaatatttgtgcctcttcttttcaatatgttgcttgaatccaaaagtgacaaggaggga
catgtcattagctcttgcatagaaactcttgcatgtatttctggtcggataagatgggag
tcttacttcagcctgttgatgagatcctttcgtctcatggcttccaagcatgaaactaac
aagagacttgtacggctgatttgctctttattggacagcttttgttttgttgagagaaat
tcatcatatatagatttagacaagcaggatcaccaaactgagcacaaagaaatagttagg
gatgagagaataatggatttaagtaatagctgtgataaagacattgttatttctcctcag
atacaggaacgcttacaaaagagcatccttcctgaaatgaataaaatcatgatttctaac
tcagatgttgtaaatgtttcagttagccttgctgcagtgaaattgttgaaacttatgcca
aagggtacaatggaatcagagctccctcgcattatacagcagattgctaatttgctgaag
agtcgtgctgattctgtaagagatgaagcaaggactgccctagctgcatgtgccaaggaa
ttagggccacagtatttacaattgattattaaagcactacggacaacattgaaaagggga
tatgaattgcatgtgctagggtatacaatgaattttatactgtcaaaatttcaatcatcc
ttggatattggagacattgattattgtttgcagggtcttttagaaattgcagaaaatgat
attatgggtgaagttgctcaagaaaaggaagttgagaaaattgcttccaaaatgaaagag
acaaagaatagcaagtcttatgagagtttgcaactgatttctcagaatattacgttccat
agacgtgctagtgcactgcttaaacctgttgagcacaatcttcataaaacactcgcaccc
aaagaaaaagttaaagttgagtcgatgcttcggtatatagctgctggccttcagtctaat
atatccttaggtccacaagatttgcttgtttttgtatatggtttggttgaggatggtttg
caggatgaaaagattggtaggaggactgattttattacctcaccagagatggaatcttct
agatcaactaactcatccaacaatctaatgaagggcactgtggatgatatagatgcacca
aataggtatgtaattacagtgtttgcattgagacttcttgaacaccatctgaaacatatc
aaagcggataagaatgatcatcacataatatccatgttagatccctttttggaacttcta
catcaatgtctcaaatccaaatatgaaggagttatatcacagtctgtaaaatgcttggct
ttactattgagattccaccttccatccatagacattcttgggggaaacattacctcgttg
gtttttgatatggttcagagatcaggaaagattcatagtcccttgatgcagtcttccatc
aacttacttattgtgcttttaagatatgcaaatacaaccatgtcagatgttcagttaaaa
atgcttctacagtctccagttttcattgatttggaaagtagctcaaataccattgcactg
tcacttttaaaggcaattattgggcggaagctcatggttccagatctttatgatttgata
actagagttgcacatctaatggtcactagtcaaattcaacctatccgcaagcaatgtagt
caaattctattaaagtttctccttgactatcctcttggtgagaagcgtttgcagcaacat
atagattttttggttgcaaatctcagctatgaacacacatgtggccgagaagctgtgtta
gaaatgttacatgtgatcattcagaaatttccgagtaatgtggttgatgaacaagcagaa
accttttttctcccattagtggcacgtttggttaatgataatgacaagggtattcgggct
atggtaggatatgtcttgaaagaattgattggtcgtgtgagtcagcggccgttgcaacgg
atgctaacatttggtctcttgtggtataagggtgagaagaaacagctatggtgtcctgct
gcacaggttttaggtctcttgatagaagtgatgaagaaaagttttcaggcacatgttgaa
gatgtgagatctagagcaattgacatcttaaaatgtgcagttgctgcagctagtaatgaa
aaatctgaggctgctgatattgaaatgctggctttttggcaagaggcatattattcactc
atcatgttggaaaagttgctacatcaatctcccgaaatttccttacacaaagactttgag
gaaatatgggacttgatttgttcgcttctagttcatccacatgtgtggttgcaaaatatt
tctggccgtcttatagctatttacttctctacttgtggatctgaagtagttacaaagagc
caggcaaatggaaaaactgcaatgcttttacaaccaagcaggctcctactactagctgca
tctttttgtcatcaacttgacatggacatggatcttcttgataactgcatgggtgatatg
agtatggttgttgaaaatcttgtatatgtcacctgtgccctgtattcctttgtgaaaagc
aggccacaagtagatctgaaggatttcttttctacccttgatgcacacaatcagtcactt
ataatggaggcactagcattgcttggttcaaaaacttgtacaaaggtttgtgcctgtttg
ctttctagagagaagaaggatgtttctgaacttgaggacaaaaatgaatttcaagatctt
gaaacatcgttatatgaacccatctttaagaagatgggaaaaatcgcacgtcaagcgaaa
gatttacagactaaggccgtcttcaagtggtataaagctatttccactcatcagggccat
gaaggaatccaacgctatggatcaacaatattactaccattgtataagatcatagaaggt
tatgcagggaatgtggtttctgggaacttgaagctattggcggaggaagttctgaaccac
atgaaagatatcatgggggttgagggttttgtgcaagcctataatttagtgaggcagaaa
gtcaaggcaacccacagcaagagaaagcaaacagaaaaagtttctgcacttgttaaccca
attcggcatgcacaaaagaagagaaagttagcagtgaaacgccaagctcagaagaaacga
aaggtcatgaaaaccaggatgcagagaagctga
DBGET
integrated database retrieval system
