Cryptomeria japonica (Japanese cedar): 131075082
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Entry
131075082 CDS
T10556
Name
(RefSeq) syntaxin-52
KO
K08503
syntaxin of plants SYP5
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131075082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131075082
Membrane trafficking [BR:
cjf04131
]
SNARE
SNAP-25[C] (Qc)
STX8
131075082
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Use1
DUF5345
STX6_10_61_N
YjcZ
Sarcoglycan_1
FapA
KLRAQ
Motif
Other DBs
NCBI-GeneID:
131075082
NCBI-ProteinID:
XP_057867881
LinkDB
All DBs
Position
3:complement(536793452..536841503)
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AA seq
235 aa
AA seq
DB search
MASSGGGESWMKEMKEASALADDISARIAERASLPAAGPETQRHLSAIRRKITILATRLD
TLESLLHKLPSKQPLTEKELHRRQDMLVNLRSRANQMASTLKMSTFAKRDDLLGQDSKQL
SEINRTSGLDNYGLVGLQRQIMKEQDEGLEKLEETVISTKHIALAVNEELDLQTHLLDSL
DQDVDATGFRLQRVQRRLAVLSKKAKSSCSCMCLLMMVIAIVVLAVVIWALIKFL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcgggaggaggggagtcatggatgaaggaaatgaaagaggcgtcggcactt
gctgatgatatcagtgcgagaatcgcagagcgggcatcgctgccggcggcggggccggag
acgcagcgccatctctctgctatccgccgcaagatcaccattctggccaccaggcttgac
accctggaatccctcctccacaagcttccttccaaacaacccttaactgaaaaagaatta
catcgacgacaagacatgcttgtcaatcttcggtcaagagcgaatcagatggcttctact
ttgaaaatgtcaacctttgctaaaagggatgatttgcttggccaagatagtaaacagctt
tcagaaataaatagaacctctggactggacaattatggtcttgttggactgcaacggcaa
attatgaaagaacaagatgagggtcttgaaaaactggaggagactgtaataagtaccaag
catatcgcattggctgtgaatgaagaattggacttgcagactcatcttcttgatagttta
gatcaagatgttgatgcaacaggcttccgactgcagcgtgtacaacgtagactggctgtg
ctgagtaagaaggcaaagagcagttgctcatgtatgtgcttgcttatgatggttattgca
attgtcgtcctggctgtggtgatttgggcactaattaagttcttgtga
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