Cryptomeria japonica (Japanese cedar): 131075983
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Entry
131075983 CDS
T10556
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131075983
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cjf01007
]
131075983
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131075983
Enzymes [BR:
cjf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
131075983
Amino acid related enzymes [BR:
cjf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
131075983
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
131075983
Prokaryotic type
Other AARSs
131075983
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
131075983
NCBI-ProteinID:
XP_057868979
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Position
9:479945200..479947908
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AA seq
631 aa
AA seq
DB search
MIRMARALSLFFSAPPHTYSTRFRQKSASAGFRTLHQPIIHSNVKTKSLRCSSRQSSAQT
TSTSKQSAIDSRTGEKEDEKKNRVSTRQRVNKGDQEEDIDPRQFRENRLQVLAAMKDSGV
NPYPHTFHVSLSIAAFIEKYGGLSSGEHLNDVEVSLAGRIMSKRSSGTKLNFYDLHADGA
KVQVMADASSSGMEGDEFVKHHAGIKRGDIVGICGHPGKSKRGELSIFPSSMTVLSPCLR
MLPVKDDRVRTKESEGDDMSGIWAPGRPRHPERYALKDQETRYRQRYLDLMVNSEVRNIF
KTTSKIKSYVRQFLEDLDFLEVGTPMMNMIPGGAAARPFLTHHNDLDMRLYMRIAPELRL
KELIIGGFDRVYEIGTQFRNEGIDLTHNPEFTTCEFYMAYKDYNDLMELTEQMLPGMVKK
LTGGYKIKYHADGADRDPIEIDFTPPFRRIDVIQGLEEAAGLDIPKDLSSDEANKYLIDA
CNKFDVKCSSPQTTARLLDKLVEHFLEETCLNPTFIINHPQIMSPLAKWHRTRPGLAERF
ELFVNKHELCNAYTELNDPIVQRQCFADQLKDRQSGDDEAMAFDEAFCTALEYGLPPTAG
WGMGMDRLAMILTDSQNIKEVILFPAMKPQL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaatggctcgagccctatctctatttttctctgcaccaccacatacgtattca
actcgatttagacaaaaatctgcatccgctgggtttcgaactttgcaccagccgatcatc
cacagcaatgtaaaaacaaaaagcctgcgttgtagctctcggcaatcttcagctcagaca
acttcaacctccaaacagtccgccattgactctagaacaggtgagaaagaagatgagaag
aagaacagagtttccaccagacagcgtgtgaataagggcgaccaagaggaagacattgat
cctaggcaattccgtgaaaacaggttgcaagttttggcagcaatgaaggattctggagta
aacccttatcctcacacgtttcatgtatctctatccatcgctgctttcattgagaagtat
ggaggtttaagtagtggagaacatcttaatgatgtagaagtttctttagctgggaggata
atgagtaagaggagctcaggaacaaagctgaacttctatgatttgcatgctgatggagca
aaagtacaggttatggcggatgcaagcagctcaggaatggagggagatgaatttgttaag
catcatgctggaataaagcgtggtgatattgttggaatttgtggccatccgggtaaaagt
aaaaggggagaacttagtatatttccatcatccatgacggttctttcaccttgtttacgg
atgctcccagtaaaggatgaccgtgttaggacaaaggaaagtgagggagatgacatgtcg
ggtatttgggctcctggtcgtcctagacaccctgaaaggtatgccctgaaagaccaggaa
acaagataccggcaacgctatctagatttgatggttaattctgaagttagaaatatcttc
aaaacaacatcaaagattaaatcgtatgtacggcagttcctggaagaccttgattttctg
gaggttggaacaccgatgatgaatatgatacctggtggagctgctgccaggccatttttg
actcatcacaatgatcttgatatgaggttatacatgcgcattgcgccagagcttcgcctg
aaagaacttattattgggggatttgatcgagtatatgaaatcggaacacaatttcgaaat
gagggcatagatctgactcataacccagagtttactacttgtgaattctatatggcttat
aaagattacaacgatttgatggaactcacagagcaaatgttgccaggaatggttaagaag
ttaactggtggctataaaattaaataccatgctgatggagcagacagggatcccatagaa
attgacttcactcctccttttagaaggatagatgtaatccaggggttagaagaagcggca
ggtcttgacattcccaaagatctgtcatctgatgaggcaaataagtatcttatagatgct
tgtaacaaatttgatgtgaaatgctcttccccacaaacaacagctcgtttgctggacaag
cttgtggagcatttcttggaggagacatgcttgaacccaaccttcatcataaatcatccc
cagatcatgagccctctggcaaagtggcacagaacaagaccaggattagccgagcggttt
gaactatttgtaaataagcatgagttgtgcaatgcatatactgagctcaatgatccaatt
gtccaacggcaatgctttgcagatcagctcaaggatagacaatcaggtgatgatgaagca
atggcttttgatgaggcattttgtactgcattagagtatggtttgccaccaactgctggt
tggggaatgggtatggatcgtcttgcaatgattttaacagactcccagaatatcaaggag
gttattcttttccctgcaatgaaaccccaattatga
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