Cryptomeria japonica (Japanese cedar): 131076115
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Entry
131076115 CDS
T10556
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131076115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131076115
03036 Chromosome and associated proteins [BR:
cjf03036
]
131076115
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131076115
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131076115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
131076115
NCBI-ProteinID:
XP_057869148
LinkDB
All DBs
Position
10:complement(324831815..324979609)
Genome browser
AA seq
1085 aa
AA seq
DB search
MVILDSIQSGLANCASYGADNMEFIPKVRAPDYFIEPSVAELITRECLEPGYCRRVLDFT
VGRIGYGYVKFFGETDVRWLDIEKNVEFNSCEVWVYRNESNKPSMGKGLNKAAEVTLFIK
GAVGYEGTELDKYTDRLKRKTEWQGAQFISFNASNGEWKFLVQHFSRFALDADEDDDGRN
SDVAMQESPRHLEVLEKAEEDAIGAVFAEETANFRYPNAEMNEIPEEQNPQDQMVLNEFQ
ATSRQRVLSHSLPEHLGLDPEKMQQMKILFLSADEEAEDISMPGNRAESSWGYRHSLTTP
GSRKASARSSAKGVVYLTESQQSPHIVSAKKKASPNTTWQNSPYSGRAAIGNQRMLEYNK
DTSPSILMTKQNKGEYAATKRAKIVGFCLDAKGESPISTHSRNVVDAALFMGRSFRVGWG
PNGLLVHSGTPVGQMGHVEGLSSFIKIEQVAIDKIVRDDQAKVNDDLVDFQFISPLKLHM
RMSKVLNGLENSHHNLKLRGLVCSRSELPDVCEGYQELIGKQLNVPGLSRSKRILLMHQS
MVWYLLSVLFSERETNSISEDNNGELDGMQDIKNGSIKIDPEAEPLIRRAQFSGWLQESV
CHRVQEEISHRKEGSELEQIFSFLSGRQLGEAVQLAAYRGDVRLACLISQAGGSMINRKD
MASQIETWDTEGLDYSFMEKDRLKLYKLLAGDIQGALEGNTVDWKRYLGLIMWYDLPPDT
SLSNIIEFYRELVDQGIGPSPVPIYIDEGPLEEALNLDVEGYYDLTYYLMLLHASDGCKY
VNLKKMFTSFTSTYDALDYHMTWHQHAILQAIGVLEYTDLHLLTMSFVSQLLCVGECHWA
IYAVLHMPPNPDYPMLHEKVIKEILCQYCEIWNSEEIQKKFIEEELGIPSEWMHEALAMH
CQYYGDSMKALEHLLKSLQWQRAHLIFMTLVAPALFCSSQHSEIWKFASFMEGNKLEIAD
WDLGAGIYMDFYTLRQSFQDNQLTEELDSLEKKNVSCRDLYVRLKESLCLWRNKFPLNAR
VAFSKMADEVTSLLMSENRGDMQTQSLQISCFDTIIDAPVPEDLRLCRLQDAVSVFTSWL
SEVTS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggttatattagatagcattcagagcggcttagcaaattgtgcttcttatggtgccgat
aatatggaatttattccaaaggttcgtgctccagattattttatagaaccttcagtggca
gaattaattaccagagagtgtctcgagccaggatattgtcgcagggttttggattttacc
gtaggaagaataggctatggatatgtcaagttttttggggaaacagatgtgagatggttg
gacattgaaaaaaatgttgaatttaatagctgtgaagtttgggtatacagaaatgaaagt
aataagccttctatgggtaagggtttgaacaaggctgcagaagttaccctattcattaaa
ggagcggttggttacgaaggcacagaactagataagtacacagacagattaaagaggaag
acagagtggcaaggtgctcagttcatttcatttaatgcttccaatggtgaatggaaattt
cttgtgcaacattttagcaggtttgcactggatgcggatgaggatgatgatggacgaaat
tcagatgttgctatgcaggaaagtccccgacatttggaagtgctggaaaaggcagaagaa
gacgccattggagcagtttttgcagaagagactgctaactttcggtacccaaatgcagag
atgaatgaaattcccgaagaacaaaatccccaggatcagatggtactgaatgaatttcaa
gccacttctcggcaacgtgtattgtcacattctcttcctgagcatcttggacttgatcct
gaaaaaatgcagcaaatgaagattttatttttatcagcagatgaagaagctgaagacatt
tcaatgccaggaaatcgagctgagtcatcttggggctatagacattcacttacaactcca
ggatctagaaaggcttcggcgagaagctcggctaagggagttgtttacttaaccgaatca
cagcagtctcctcatatagtttctgccaagaagaaggcaagccctaatactacatggcaa
aattcaccatattcaggtcgtgctgcaattggtaatcaacgtatgctggagtataataaa
gatacttctccttccatccttatgacaaaacaaaacaagggagaatatgctgcaacaaag
agggcaaaaatagtgggtttttgtctagatgcaaaaggtgaaagtcctatatctacgcat
tctcgtaacgttgttgatgctgcattgtttatgggaaggtcttttcgagttggatgggga
ccaaatgggttacttgtgcacagtggtacacctgttggacagatgggtcatgttgaaggt
ttatcatcttttattaaaatagaacaagtcgccatcgataaaatagtgagagatgaccag
gcaaaggtaaatgatgatcttgttgattttcaatttatatcccctcttaagcttcatatg
cgaatgagcaaagtacttaatggcttagaaaatagtcatcataatttgaaactcaggggt
cttgtttgcagccgttctgaacttccagatgtctgtgagggatatcaagagcttattggg
aagcaactcaatgttccagggttatctagatctaaacgaatactactaatgcatcaaagc
atggtttggtatcttttgagtgttctattttcagaaagagagacgaattctatatctgaa
gacaataatggagagttagatggtatgcaagatatcaagaatggctccataaaaattgac
cctgaggcagaacctttgatccgtagggcacagtttagtggctggttgcaagagagtgtt
tgtcaccgtgttcaggaagaaattagccatcgaaaggaggggagtgaattggaacaaata
ttttcctttttgagtggcaggcaactcggtgaagctgtccaactggctgcttatagaggg
gatgtgagattggcttgcctaattagtcaagctggtggatccatgattaataggaaggat
atggcctctcagattgaaacgtgggacactgaaggtctggattattctttcatggagaag
gataggttgaagctttataagttgcttgcaggtgacattcaaggtgctcttgaaggcaac
acagtggactggaaaagatatctaggcctgataatgtggtatgacttacctccagatact
tctctttcaaacattatcgaattttaccgagagcttgtggatcaaggaataggtccatct
ccagttcccatctacattgatgaaggacctctggaagaggcattgaatctggatgtcgag
ggctactatgatttgacctattatctgatgctattgcatgctagtgatggatgcaagtat
gtaaatttgaagaaaatgtttacttcatttacatccacatatgatgcccttgactaccat
atgacttggcatcaacatgctatcctgcaagcaattggtgtactagagtatacagatcta
catttattgaccatgagctttgtttcacagctcctttgtgtgggagagtgtcattgggca
atttatgccgttcttcacatgccacccaatccagattatccaatgcttcatgagaaagtt
atcaaagaaattttatgtcaatattgtgagatatggaactcggaggaaattcaaaagaaa
ttcattgaggaggaactgggcataccatctgaatggatgcacgaggctttggctatgcac
tgccaatactatggggactcaatgaaagcacttgaacatcttcttaagagcttacagtgg
caaagggctcacttaattttcatgacattagttgcaccggcactgttttgttcatctcaa
cattcagagatctggaagtttgcaagttttatggaagggaacaagttagagattgctgat
tgggatttaggtgcgggcatttacatggacttttataccttaagacaatcgttccaagat
aaccagttaacagaggaactggactctctagaaaagaaaaatgtttcatgccgggactta
tatgttcgtctgaaagagtcattgtgcttgtggagaaacaaatttccgttaaatgcaagg
gttgcattctcaaaaatggcagatgaggtaacctcgctacttatgtcagagaacagagga
gacatgcagactcaatccttgcaaataagttgttttgacacaataattgatgccccagta
ccagaggaccttcgcctctgccgtctccaagatgctgtttcagttttcacttcatggctt
tcagaagtgacatcgtaa
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