Cryptomeria japonica (Japanese cedar): 131076270
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Entry
131076270 CDS
T10556
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
131076270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131076270
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
131076270
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA
VWA_2
Ku_C
Motif
Other DBs
NCBI-GeneID:
131076270
NCBI-ProteinID:
XP_057869344
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All DBs
Position
4:complement(586243614..586324752)
Genome browser
AA seq
710 aa
AA seq
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MARTKESLVLLLDISPSMHNHLQDVARTVSILVKRKIFFNKSDELGLVLFGSEEANNDLQ
KEVGGYESVAVKRPIRVVEEDLLEYLSELPRGRAQGDFLDALVVGMDLLIKKHGAGMKGN
KVNKRLYLITGARSLIKDPDEGTKEDQVDVIANQMKEHGMKLDVVVLQQRISGLASSNIF
HENVSLLKRFSKRAQAEVLIVESPVSLLSAVKARNISPVTLFRGDLELTPMIRVKVWVYK
KTIQERVPTLKKYSEKAPPNDSFASREVKMDFEYKSREDPDKTIPPEQRIKGFRYGPQVV
PISTMEEDTLRFKPEKGLKLLCFTDTSNVPRHYYLKDTNIIVPEPGNTMAILAVSAVARA
MEDTKKVAIVRCIWRQGQKQAVLGLLTPNLSSSENVADSFYLNVIPFAEDIREFPFASFN
DFPPSQQPNDSQQEAADNFVRMFDLAPPGREEILQPELTLNPVLERFYSSLDAKLRNPDA
DVPPVDDLLMRIVEPDPEIVSENEFALNRFCSQFQLKVNPKKDKMSKRFWRDKAPLSEEV
GKDDSVDLQSDISFESLAARKVEEVGGLTPVQDFEAMLARRDSDEWVPKAIREMKKLISD
LLDNSYNGNTYSKALDCLLALRSGCVQQEEPMGFNNFMRELAIKCRSKRLNDFWELIVSK
NLTLINKGEAADSDVTEEEAKAILAEGNAGRAPDQPPEVDEMELLLGEVV
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaccaaggagtcgctggtactcttgcttgatatcagtccatctatgcataat
catctccaagatgtggcaaggaccgtgtccatacttgtaaagaggaagatattttttaat
aaaagtgatgaactagggcttgttctctttgggtcagaagaagctaataatgatttgcag
aaggaggttggtggctatgaaagtgtggctgttaaacgaccaataagggttgtcgaggaa
gatctccttgaatatctaagtgaactaccaaggggtagagctcaaggggattttctagat
gctttagtggttggaatggacttgctgataaagaaacacggagcagggatgaagggaaat
aaagtgaataaacgcctttatctaatcacaggtgctcgatcattgattaaagatcctgat
gaaggaacaaaagaagatcaggtagatgtgattgctaatcagatgaaagagcatggtatg
aaacttgatgttgttgttctccaacagagaatttctggactagcaagctcaaacatattc
catgaaaatgtctcccttctaaaaagattttctaagagagcacaagcagaggtgttaatt
gttgaaagtccagtgtcattgttgagtgcagtaaaagctcgtaatatttctccagtaact
ttattcagaggagacctggagctgactcccatgatcagagttaaggtgtgggtttataaa
aagacaattcaagaaagggttcccactctaaagaaatattcagaaaaggcacctccaaat
gattcttttgcatcacgagaagtgaagatggattttgagtacaaaagcagggaagatccg
gacaagacaattcctccagagcaaaggattaagggatttcgttatgggccacaagtggtt
cctatttccacaatggaagaagatacactccggttcaagcctgagaagggcctgaagctt
ttgtgttttacagacacatcaaatgttccaaggcactattatttgaaagatacaaatatt
attgtcccagaaccaggcaataccatggccattcttgcagtttctgctgtggctagggca
atggaagataccaaaaaagtggccattgtgcgttgtatttggagacagggacaaaaacaa
gctgtacttggtcttttgactccaaatttatcctcctctgaaaatgttgcagattcgttt
tatttgaatgtaattccttttgctgaggacattagagaattcccatttgcttctttcaac
gattttcctccatcacagcaacctaatgattcccagcaagaggcagcagataatttcgtt
agaatgtttgacttggcaccacctggaagagaggagatactacaaccagagttaacattg
aacccagttttagagcgattctacagttctcttgatgcaaaattgaggaatccagatgca
gatgttcctccagttgatgatcttcttatgaggatagttgagcctgacccagagattgtt
tctgaaaatgagtttgctttaaatagattttgtagccagtttcaattgaaagtgaatcca
aagaaagacaaaatgtccaagagattttggagggacaaagccccattgtctgaagaggtt
ggtaaagatgattccgttgacctgcaaagtgatatctcctttgaaagtcttgcagctagg
aaagtagaagaagttggaggcttgacaccagttcaagattttgaagctatgttggcacgc
cgtgatagtgatgaatgggttcctaaagcaatccgagaaatgaaaaaactcatcagtgat
ctgttggacaactcttacaatggaaacacatacagtaaagctctggattgtctacttgca
ctgcgaagtggatgtgttcaacaagaggaaccaatgggattcaataatttcatgcgtgaa
ctagcaattaaatgccggagtaaaagactcaatgatttttgggagctaatagtttccaag
aatctgactttgataaacaagggtgaagcagctgatagtgatgtcaccgaagaagaagcg
aaagcaattttagctgaaggtaatgcaggccgagcaccggaccagccaccagaagttgat
gaaatggaactactacttggtgaagtagtgtga
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