KEGG   Cryptomeria japonica (Japanese cedar): 131076490
Entry
131076490         CDS       T10556                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131076490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjf03019]
    131076490
   03041 Spliceosome [BR:cjf03041]
    131076490
Messenger RNA biogenesis [BR:cjf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     131076490
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     131076490
Spliceosome [BR:cjf03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    131076490
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 131076490
NCBI-ProteinID: XP_057869687
LinkDB
Position
5:402370795..402375584
AA seq 423 aa
MESKKRRMEDNENGLKEETEINVDTARKMMEGFTREQLLDILAEASAKHSDVAEQVRDIA
DADPALRKLFVRNLGFDTTTESFKAFFSQFGEVQEGVVIIDKKTGKSKGYGFLTFKHLDG
ALNALKNPSKIIEGRMTITRLASSQPSAIDVSDRKIFVGNVPTDMPSERLLSIFSEYGEI
EEGPLGFDKQPGKSRSFALFIFKSPEGAKLALEEPVKIVDGNRMICKLAVEGQQQQQQRP
YVNQSQQQSQPQPQLQPQSHHQLGSSVQLGGGFGNTGFPSYQGLNHNGISGAPNPGNIPG
GSMMPSANSSFMNQGLPSNPNTSNPVPSSLGMGGGYGGGYGAPQVGGYNGSQGAGAYGQM
GTYGGPPVYGAPAPPSSGGFSEAGRNAQPSYQNQHQHRQSAPPANRVTGGGIYPNAAQPF
YPV
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggagtcgaagaagcgaaggatggaagacaacgagaatggcctgaaagaagagaccgag
ataaatgtagacacagcgcggaaaatgatggagggctttacgcgggagcagcttctcgac
attctagcggaggcgtctgcaaagcatagcgacgttgcagagcaagtgcgggacatcgca
gatgccgacccagcacttcgaaagcttttcgtcagaaacctgggcttcgacaccaccact
gaatcctttaaggcattcttttcccagtttggggaagtgcaggaaggcgtggtgataata
gacaagaagacgggcaaaagcaagggctacgggtttctgaccttcaagcacctggacggc
gccctcaatgccctcaagaaccctagcaagatcatcgaaggccgcatgactataacccgc
ttggcctcctctcagccaagtgccattgatgtttcggaccgcaaaatcttcgttggaaat
gtccctactgacatgccctctgaacgtctcttaagtatattttctgagtacggggaaatc
gaagaagggcctctggggtttgacaagcagcccggcaagtcgaggagctttgcattattc
attttcaagtctccggagggtgcaaagcttgctttagaggagcctgtaaagattgtcgat
ggaaataggatgatctgcaaattggccgtcgaagggcagcagcagcaacagcaaaggccc
tatgtaaaccagtcacagcagcagtcgcagccgcagccgcagctgcagcctcaatctcat
caccagcttggctcttctgtgcagttgggtggtggttttggcaatacgggcttcccttcg
tatcagggtttgaaccataatggaatttcaggtgctccaaacccaggcaacattcctggc
ggttccatgatgccttcagccaattcgtctttcatgaatcagggtttgccttcaaaccct
aatacatcaaatccggtaccctcgtctttgggaatgggcggtggatatggagggggttat
ggcgctcctcaggtgggaggttataatgggagtcagggagcaggagcttacggtcagatg
ggaacctatgggggccctcctgtttatggggcccccgcacctcctagttcgggtggattt
tcagaagcaggacggaatgctcaaccgtcctatcaaaatcaacatcaacatcgacaatca
gcgccacctgcaaacagggtaactggtggaggaatttatcctaacgctgctcaaccattt
tacccagtatag

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