Cryptomeria japonica (Japanese cedar): 131076579
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Entry
131076579 CDS
T10556
Name
(RefSeq) squalene synthase 1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00100
Steroid biosynthesis
cjf00909
Sesquiterpenoid and triterpenoid biosynthesis
cjf01100
Metabolic pathways
cjf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
131076579
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
131076579
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cjf01006
]
131076579
Enzymes [BR:
cjf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
131076579
Prenyltransferases [BR:
cjf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
131076579
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
PhoU_div
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
131076579
NCBI-ProteinID:
XP_057869807
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Position
10:693123490..693244536
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AA seq
409 aa
AA seq
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MSSIGAILKHPEDLPALLKMKFAATHASKQIPSDPDLAFCYTMLHKVSRSFAFVIQQLGV
ELRNAVCIFYLVLRGLDTVEDDMSIPVDTKLPILTNFHQHIYDPSWHFSCGVNDYKELMD
QFHHVSAAFLALGKRYQEAIEEITRRMGAGMAKFICQEVETVEDYDEYCHYVAGLVGLGL
SRLFHAASLEDSSPDLLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWDKYTINL
EALKEEERSKEAVQCLNEMITNALRHATDCLKYMAALRDPAIFRFCAIPQIMALGTLEIC
YNNVEVFRGVVKIRRGLTAKIMDRTKSMADVYEAFFDYSGKLASKVPKDDPNADVTLKYV
DDIQRSCIASGLLSKRRSLTIDSKKGHEVFLAICVLLLAVLLAILTFKL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcattggggccatattaaagcatccggaggatctgccagctttgctgaaaatg
aagtttgcagcaacgcatgccagtaagcaaattccttcggatccagacttggcattctgt
tacacaatgctacacaaggtctctcggagctttgcctttgttattcagcagctgggagtt
gagcttcgcaatgctgtttgcattttctatttggttcttcgaggacttgatactgttgag
gatgatatgagtattccagtggatacaaagctaccaattttgactaatttccatcagcac
atatatgatccttcgtggcacttctcttgcggagttaatgactacaaagaactgatggac
caatttcatcatgtgtctgctgcttttttagcgcttggaaagagatatcaagaagcaatt
gaagagataactagaaggatgggtgcagggatggcaaaatttatttgccaagaggtagaa
acagttgaggactacgatgaatactgccattatgttgcaggattagttggtttgggattg
tctcgactctttcatgcagcttctcttgaggactcgtctccagatttgttgtccaattca
atgggattgtttcttcagaaaaccaacattattagagattacttggaagacataaatgaa
ataccaaaatcacgcatgttttggccacgtgaaatatgggacaagtacaccatcaatctt
gaggctttgaaagaggaagagaggtcaaaggaagctgttcaatgccttaatgaaatgata
actaatgcactaaggcatgctaccgactgccttaagtacatggcagcattacgtgatcca
gctatattccgattttgtgctatcccacagatcatggctctgggaacgttagaaatttgt
tataataatgtagaggtattcagaggagttgtcaagatccggcgaggtttgacagccaaa
ataatggacaggaccaagagtatggctgatgtgtatgaggctttttttgattattctgga
aaattggcttccaaggttccaaaagatgatcccaatgctgatgtgacattaaaatacgtt
gatgacatacaaaggtcttgcatcgcctctggtttgctttctaaaaggaggagtttaact
atcgatagtaaaaaaggacatgaagtatttctggcaatttgtgtacttctgttggccgtt
ttgcttgctattctcacattcaaactgtaa
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