Cryptomeria japonica (Japanese cedar): 131076581
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Entry
131076581 CDS
T10556
Name
(RefSeq) cell division control protein 48 homolog E isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cjf
Cryptomeria japonica (Japanese cedar)
Pathway
cjf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131076581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131076581
03009 Ribosome biogenesis [BR:
cjf03009
]
131076581
04131 Membrane trafficking [BR:
cjf04131
]
131076581
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131076581
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131076581
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131076581
Membrane trafficking [BR:
cjf04131
]
SNARE
SNARE associated proteins
Others
131076581
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131076581
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131076581
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
RNA_helicase
NPHP3_N
AAA_28
nSTAND3
Mg_chelatase
AAA_17
Parvo_NS1
Vps4_C
AAA_18
AAA_7
ATPase_2
nSTAND_NTPase5
DUF815
Viral_helicase1
SLFN-g3_helicase
ABC_tran
TsaE
ResIII
NB-ARC
NACHT
Motif
Other DBs
NCBI-GeneID:
131076581
NCBI-ProteinID:
XP_057869818
LinkDB
All DBs
Position
10:693828431..693836351
Genome browser
AA seq
816 aa
AA seq
DB search
MNLCMHKNAICCTSLRCFASITWKGTEKGFSTAILDRKKSPNRLVVDEATQDDNSVVSLN
FQTMETLHFFRGDTILIKGKKRKNTVCIVVGDDFCEAHKIRMNKVIRSNLRVRLGDVVSV
HQCTDAKYGRRVHILPIDDSIEGISGNLFDVYLKPYFMEAYRPVRKGDLFLVRGGMRSVE
FKVIETDPGEYCIVSPDTEIFCEGEPINREDEEQLNEVGYDDVGGLRKQMAQIRELVELP
LRHPQLFKAIGVKPPKGILLYGPPGTGKTLIGRAVANETGAFFFLINGPEIMSKLAGESE
SNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIV
MGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLEHAAKDT
HGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFKTALVSTNPSA
LRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMAPSKGVLFYGPPGCG
KTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARQSAPCVLFFDELDSIA
TQRGNSSGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLI
YIPLPDEPSRFQIFKACLRKSPVSRDVDVSVLAQYTNGFSGADITEICQRACKYAIREHI
EKDIQREKYRSENSEAMDEDETDIAEINAAHFEEAMKYARRSVSDADIRKYQAFAQTLQQ
SRGFGSEFRFADQSAANTVTNAFATAGAGEDDDLYS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtgtatgcacaaaaatgccatttgctgcacaagcttgagatgttttgcaagt
ataacctggaagggcacagagaaaggtttcagcactgcaattttggaccgtaagaaatct
ccaaatcgattggttgtggatgaagctacacaagatgataattcagttgtgtctcttaat
ttccaaacaatggaaaccctgcatttctttcggggtgatactatccttattaaggggaaa
aagagaaagaatactgtttgtattgttgtgggtgatgacttttgtgaagcacataaaatc
agaatgaataaagttattagatcaaatttgagagtaagattaggggatgtggtctctgtt
catcaatgcacggatgctaaatatggcagacgtgtccatattttgcccattgatgattca
attgagggaatttcaggcaacctgtttgatgtctacttgaaaccttattttatggaggcc
tatcgtccagtaagaaaaggtgaccttttccttgtacgaggagggatgcgaagtgtggaa
tttaaagtcattgaaacagatcctggtgaatattgtattgtttctccagatactgaaatt
ttttgtgaaggagagcccataaatcgtgaagatgaggagcaattgaatgaagttggttat
gatgatgtcggtggtcttagaaagcaaatggcacagatcagggaactagtcgaactgccc
cttcgacacccacagctttttaaagctattggtgttaaacctccaaagggaattttactt
tatggtcctccgggtacaggaaaaaccctcattggtagagcagttgcaaatgagacgggg
gccttttttttcttaattaatggaccggagatcatgtcaaaacttgctggtgagagtgaa
agcaatctcagaaaggcttttgaggaagcagagaagaatgctccttctatcattttcatt
gatgagattgattctatagctccaaaaagggagaaaacaaatggcgaggtagagagacgc
attgtatctcaactcttgacattgatggatggtctgaaatctcgagctcacgtcatagtc
atgggtgcaactaacaggcctaacagtattgatcctgctcttagaagattcggcaggttt
gatcgtgagattgatattggcgtcccagatgaaattggtcgtttagaggtgcttcgtatc
cacacaaagaatatgaagctagctgaagatgttgatcttgaacatgctgcaaaagataca
catggttatgttggggctgatcttgcagcactttgcactgaagctgccctacagtgtatt
agggaaaaaatggatgtgattgacttggaagatgaaacaattgacgctgaagttctgaat
tctatggccgttacaaatgagcactttaagactgctttggtatccaccaacccctctgct
cttcgagagacagttgtagaagtgccaaatgtttcttgggaggatatcggtggtctggaa
aatgtgaagagagagcttcaagaaactgtgcaatatcctgtggagcaccctgagaaattt
gagaaatttggcatggctccttctaaaggtgtcctattttatggaccacctggttgtggt
aaaacactattagcaaaggccattgccaatgagtgtcaggcaaactttattagtgtgaag
ggtccagaattactaacaatgtggtttggagaaagtgaggccaatgtgcgggatattttt
gataaggccaggcagtcagcaccctgtgtcctattttttgatgagcttgattcaattgct
actcagcgtggtaatagttctggagatgctggaggtgcagcagacagagttttgaaccag
ttactgactgaaatggatggcatgactgcaaagaaaactgttttcattataggagcgaca
aatcgacctgacattattgatcctgctttgttaagacctggccgtcttgatcaattaata
tacataccgttacctgatgaaccttcacggtttcaaatttttaaagcttgtctccgaaag
tcacctgtttcaagagatgttgatgtttcagttcttgctcagtacacaaatggattcagt
ggagctgatattaccgaaatttgtcagcgagcctgcaaatatgctattagagagcacatt
gaaaaggacattcaacgggagaagtatagaagtgaaaactctgaggctatggatgaagat
gaaactgatatcgcagaaataaatgctgcccattttgaggaagctatgaaatatgcccgc
cgaagtgttagtgatgcagatatacgtaaatatcaagcttttgctcaaacattacaacaa
tctagaggttttgggtcagaatttagatttgcagatcaatcagctgccaatacagtcaca
aatgcttttgcaacagcaggagctggcgaggatgatgatctttatagttag
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