Cryptomeria japonica (Japanese cedar): 131077041
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Entry
131077041 CDS
T10556
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131077041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131077041
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131077041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
131077041
NCBI-ProteinID:
XP_057870388
LinkDB
All DBs
Position
10:674509854..674586934
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AA seq
499 aa
AA seq
DB search
MAFGALRAPGAPSSGFGGFGSSPAPSFQQQQQPSVQSQQHIHLFTNEKTPVTYQTKWADI
HPDSQKLLLQIEERILEYRHESQMLDQCGRLYDVSALNEDFEHDAARILQELRGNSTALE
REKVLLQELMNVVNGMLRNAEVAVRSFMIIRPRFIRPEASPSTQPATTTAVSTNFPNSTA
SQIPTSTTSLMDFYSGLPKKPSPFLQQTVARFERQLAECKQWIEELERLLLSANDEAVSS
SSDLTLLQSLPSVISNTHDFFIYVAAEVETIHQRIESMRAAYLADQRRRGDESDPFLEAD
RRELAKREAAAKRVHPALHASSFSQPSTQVTGLFTSSVAPATGFSGASPSTQSSQGAFSS
SGVGFSMFNTPASSSSSSSFLLSAPTASSSSAFGSSAASQTQAMFGSSQTSSIFGANTSS
SFPLTTATASTSSVFSTPAFGTGSTSGNLFGASSGSTTNLFGASASPSPSLFGGAGNASG
SSFGANTKSTKPKPRTSRR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcggcgcgttgagagctccaggcgcgccttcttctggattcggcggcttcggt
tcgagtcccgcaccctcttttcagcagcagcaacagccgagtgtgcaaagccaacaacat
attcatctcttcaccaacgaaaaaacgcctgtaacatatcaaaccaagtgggccgacatt
catcctgattcgcagaagcttctattgcaaatcgaggaaagaattttggagtataggcat
gagagtcagatgcttgatcagtgtggccggttgtatgacgtttcagcattgaatgaggat
tttgagcatgatgctgctcgtatattgcaggaacttagaggaaatagcactgctttagaa
agagagaaggtgctgctccaggagctaatgaatgttgtgaatggtatgctgagaaatgct
gaggttgcagttcgatcttttatgattatacggcccaggttcattcgtccagaggcttca
cctagtactcagcctgcaacgacaacagcagtatcgaccaattttccaaattcaacagcc
tcgcagatacctacttctactacatctttgatggatttttatagtgggttaccaaaaaaa
ccatctccatttttacagcagacagttgccaggtttgagagacaacttgcagagtgcaaa
cagtggattgaagagttagagcgcttgcttctttctgcaaatgatgaggctgtgagctca
agttctgatctgacactgttgcagtctttgccatcagtaatatccaacacacatgatttc
ttcatatatgttgctgctgaggttgagactatccatcagcgaatagaatcaatgcgtgct
gcttatcttgctgatcaacgccgcaggggagatgagagtgatcctttccttgaggctgat
agaagggaactggcaaagcgagaagcagcagcaaagagagttcatccagcattgcatgct
tcatctttttcacagccttctactcaggttactggattattcacaagttcagtagcacct
gcgactggcttttctggtgcatctccttccacacagtcaagtcagggggccttttcttct
tctggagtggggttttctatgtttaacactccagcatcatcctcttcgagctcatccttt
cttttgtcagcgccaacggcctcttcatctagtgcgtttggttcttctgcggcctcacag
acacaagcaatgtttgggtcttctcaaacatcctcaatatttggggcaaatacttcttcc
tcttttccattaaccacagcaactgcaagcacttcatcagtgttttctacaccagctttt
ggcacagggtccacttctggtaatttgtttggtgcatcttcagggagcacaacaaatttg
tttggagcatcggcttcaccttctccaagcctttttggtggtgctggaaatgcttcaggt
tcaagttttggagcaaataccaaatctacaaagcccaagcctcgaacatcacggcgctaa
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