Cryptomeria japonica (Japanese cedar): 131077053
Help
Entry
131077053 CDS
T10556
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03020
RNA polymerase
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131077053
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
131077053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131077053
NCBI-ProteinID:
XP_057870412
LinkDB
All DBs
Position
9:528825018..529100529
Genome browser
AA seq
1389 aa
AA seq
DB search
MAIGDTSEGNKTTSINFSKRPFIEDVGPRKIKSVRFTTMSGPEIVKAAELHVYEDQLFIQ
PGRQPREHGVLDNHLGAPNKGICSTCHGKFADCPGHYGYIKLALPVFHIGYFKNIVNILQ
CICKSCARVLCPEDERIVFLRRMRNPRAEVLQKRALLKKITDRCKRVHTCTYCGDYNGTV
KKLTSTLRITHEKYSKAPDVRNEFHLELNEAAKQNKEIRAFINKVQDDLIPTKVLNLFER
MTDEDCEVLYLFDRPEKLIVTHMAVPPVGIRPSVVTDGGSNEDDITMKLSHIMSSNLALH
AHLESGSPPDKFMETWDLLQVQVAMYINSDLPGLPPGMQPPGKPLRGFVQRLKGKQGRFR
GNLSGKRVDFTGRTVISPDPNLKVTEVAVPILMALTLTYPERVSCHNIEKLRQRVSNGAF
KYPGANFIVYPDGTRLYLRYGNMRRLAAELKNGYIVERHLEDGDIVLFNRQPSLHRMSIM
SHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALTLMGVQNNLCTPKN
GEILIASTQDFLTSSFLITRKDTFYDRAAFSLMCTYMGDASEHIDLPTPAILKPIELWTG
KQLFSVLVRPNAKMRVFVNLIVMEKNYSKSGETMCPNDGCVYFRNSELLSGQIGKATLGN
GNKNGLFTILLRDYNSHAAACCMNRLAKLSARWIGNHGFSIGIDDVQPGTRLSAKKEERI
REGYSKCDMHIDLYNKGKLALQPGCNAAQTLEAEISGELNRIREIAGSICLKELHWRNSP
LIMSLCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANS
FYSGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRNASGGV
VQFLYGDDGMDPVNMEGKDGAPLDLERLLMKTKAICPTRGSPALSVSEILRKAEERLEMD
DLQTEECYKFKIALLEFFQKRADSMRKTRSVLGLSPDATDKENPSIIERIAAEISGLTLC
QFEVFIETCIKRYHLKKMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPR
IKEIINAAKNISTPIIEAKLKCDTDVKAARIVKGRIEKTVLGEVAKSIKIVLRSGQAFLS
IKLDMKRIDSLQLDINASTVAESVLRAPKLKLKQQHLRVLDHEKLLIFPPEADRMKLHFA
MQSLRKMLTKVVVKGISTVERAVINQDKGKYNLLVEGTNLAAVMGIEGVDGRNTKSNHVI
EIEQTLGIEAARSVIIEQIEYTMKSHGMSIDIRHMMLLADVMTFKGEVLGITRFGIAKMK
DSVLMLASFEKTTDHLFDASIHGRIDQIEGVSECIIMGIPMPIGTGLLKIRQRIEKLPEL
EYGLEPLIS
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcggagatacctcagaaggaaacaagacgacttcaattaactttagcaagcga
cctttcattgaggatgttgggcctcgcaaaattaagagtgttcgttttaccaccatgtct
ggaccggagattgttaaggctgcagaactgcatgtttatgaagatcaactatttattcag
ccagggagacaaccacgtgaacatggtgttctagataatcatttgggtgccccaaataaa
ggaatatgctcaacctgccatgggaagtttgcagattgtccaggccattatggttatata
aagcttgcacttcctgtctttcatattggttatttcaagaatattgtcaatattctacaa
tgtatttgcaagtcttgtgcacgagttctttgtccagaagatgagcgcatagtattccta
cgacggatgagaaatccaagagctgaggtgttgcagaagcgtgctttgttgaagaaaata
actgaccgatgcaaacgtgttcatacctgtacctattgcggagattataatggtacggtg
aagaagcttacctcaacattgcgtataacccatgaaaaatactcaaaggcacctgatgtc
agaaatgaattccatttagaattaaatgaagcagcaaaacaaaacaaggaaatcagagca
ttcataaataaagttcaggatgaccttattcctactaaagttctcaacctttttgaaagg
atgacagatgaggactgtgaagttttatatctatttgacaggccagaaaaacttatagta
acacatatggcagttccacctgtgggcattcgtccttcagttgtcacagatggtggaagc
aatgaagatgacattacaatgaagttatcacatataatgagtagtaatttggcattgcac
gcacacctggaaagcgggagtcccccagataaatttatggaaacatgggatttgctccaa
gttcaagttgccatgtatataaacagtgacctacctggcctgcctccaggtatgcagcct
cctggaaagccgctgcgtggatttgtacagcgtctcaaagggaaacagggtagatttcgt
ggaaatctttctggaaagcgtgttgattttactggacggactgtgatttctccagatcct
aatcttaaagttactgaggtagctgtgccaatattgatggccttgaccttgacatatcca
gaaagggtttcatgccacaacattgagaaactaaggcaacgtgtgagtaatggtgctttc
aagtatccaggggcgaattttattgtatatcctgatggtaccagactatatcttagatat
ggaaatatgagacgtctggctgcagagctgaaaaatggttatatagttgaacgtcatctt
gaggatggagatattgtcctttttaaccgacagccgagtcttcatcgaatgtctatcatg
tcccatagggctagagtgatgccctggaggactttgaggttcaatgagtcagtatgcaat
ccatataatgcagattttgatggagatgaaatgaatctccatgtcccccaaactgaagaa
gctcgaactgaagctcttacacttatgggggttcaaaataatctttgtacaccaaaaaat
ggagagatcctgattgcatccactcaagatttcctaacttcctcttttttaattacaaga
aaggatacattttatgaccgtgctgcattttcactcatgtgtacctacatgggagatgca
tctgagcatattgatttacctacacctgccattttgaagcctattgaactttggactggt
aagcagctatttagtgtccttgttcgtccaaatgcaaagatgagggtgtttgttaacttg
attgttatggaaaagaactatagcaagtcaggtgaaacaatgtgcccaaatgatggatgt
gtatatttccgcaacagtgagctcctttcaggacaaattggaaaagcaacattagggaat
gggaacaaaaatggactattcactattctgcttagggactataactctcatgccgctgcg
tgttgtatgaaccggcttgctaaattgagtgcaaggtggattggaaatcatggtttctca
attggaatagatgatgtgcaacctggaactcgactctcagctaaaaaagaagagcgaata
cgagaaggttacagtaaatgtgacatgcacatagacttatataataaggggaaactcgca
ctacagcctggttgcaatgcggcacaaacattggaagctgaaattagtggtgaattgaac
agaattcgagaaattgctggcagtatttgtctcaaggagttgcattggcgaaacagtcct
ttgattatgtctctatgtgggtccaagggttcacctattaacatcagtcagatgattgct
tgtgttggacaacaatctgttggaggtcgtcgagcaccaaatggtttcattgaccgcagt
cttccacactttccaagaaatgacaaaacaccagcagccaaaggtttcgttgcaaattca
ttctattctggattaacagcaacagagtttttctttcacaccatgggtggtcgtgaaggt
cttgttgacactgcggtcaaaacagccgagacaggatatatgtctagaaggttgatgaaa
gccttggaggatctctctacacactacgatggtacagtacgtaatgcaagtggtggggtt
gttcaatttctatatggggatgatggcatggaccctgttaatatggaaggaaaagatggt
gctccactggacctagaaaggctactaatgaagacgaaggctatttgtcctaccaggggc
tcaccagccttatctgtgtctgagattttaaggaaagcagaagaaaggctagaaatggat
gacctgcagacagaagaatgttacaaattcaagattgcattattagaattttttcaaaag
cgtgctgactctatgagaaagactagatctgtgcttggattatccccggatgccactgac
aaagaaaatccttcaattatagaaagaattgcagcggagatatctggattaacactgtgc
caatttgaggtgtttattgaaacatgcattaaacgttaccatttgaaaaaaatggaagct
ggagctgcagttggagccattggagcccaaagtattggagagcctggcacacaaatgact
ttgaagacttttcactttgctggagtggcaagtatgaatatcactctgggagttcctcgc
atcaaggagattataaatgcagcaaagaatataagtactcctattatagaagcaaagctc
aaatgtgatactgatgtaaaagctgcacgcatagtaaaaggtcgaattgagaaaactgta
cttggcgaggttgctaagagtataaagatagtcttaaggtctggacaggcatttttgtcc
attaagctggatatgaagagaatagactctcttcagcttgacattaatgcatctacagtg
gccgaatctgttttgagagctccaaaactaaaattgaagcagcagcaccttcgggtttta
gaccatgagaaactgttgatttttcctcctgaagcagatagaatgaaacttcattttgcc
atgcaatcattaagaaaaatgcttacaaaggtggttgtgaagggtatttccacagtggag
cgtgcagtcattaaccaagacaagggaaagtacaatctattagttgaaggtacaaatctt
gcagctgtgatgggtattgaaggagtcgatggaagaaataccaaaagtaatcatgttatt
gaaatcgaacaaacacttggaatagaggcggctagaagtgtcataattgaacaaatagag
tataccatgaagagtcatgggatgagcattgatattcggcatatgatgcttcttgcggat
gttatgacattcaagggagaagtgctaggaataacaaggtttggcattgccaaaatgaaa
gacagtgtcttaatgcttgcatcatttgagaaaaccacggatcacctctttgatgcttcc
attcatgggagaattgatcaaattgaaggcgtaagtgagtgcattatcatgggcatacca
atgccaataggaacaggtctattgaaaatcagacaaaggattgaaaaactaccagaattg
gaatatggcctagagccgctcatttcataa
DBGET
integrated database retrieval system
