Cryptomeria japonica (Japanese cedar): 131077072
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Entry
131077072 CDS
T10556
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131077072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131077072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131077072
Membrane trafficking [BR:
cjf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
131077072
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
131077072
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131077072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
BAR
Ank
Ank_2
PH
Ank_4
Ank_5
Ank_3
BAR_2
PH_8
PH_11
PH_20
PH_13
Catalase-rel
SOS1_NGEF_PH
PH_6
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
131077072
NCBI-ProteinID:
XP_057870467
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All DBs
Position
9:complement(532946064..533008900)
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AA seq
845 aa
AA seq
DB search
MLFGKLDDSPMFRSQLQTLEESAEALRERSQKFYKGCRKYTEGLGEAYDEDIAFASALEM
FGGGHNDPIGIAFGGPVMTKYTIALREIGTYKEQLRSQVEQILNERLIHFVNIDLHDVKE
IRKRFDKASLHYDQAREKYLSLSKSTKMDIVAESEEELRHARSAFEQARFNLVSTLSNIE
AKKKFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYIHQVLAYAQQSRDRTNYEQAALAER
MQEFKRQIDRESRCSFSDTDNSPTGDGIQAVGRSSHKMIEAAMQSTAKGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQHWSKQTGNACQHSLKKGHHATDHVSGLFGRL
LYSHHHGPSQDERSVAHHTVNLLTSTIKVDAEQTDLRFCFTIVSPRKKYTLQAENTMDRM
DWIEKITGVIASLLSSQLPDQRLHFSPMSSGHHRTASESSSLCSSSDFDHTIPDENGLQR
CSAAGFCDHSGRGLHGCRTHGKQESPLELLRKVPGNDVCADCGSSEPDWASLNLGILLCI
ECSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNTYANSLWEELLESGKHARGDG
ICGRQGDFEEETHCMPFRKPNYRDTLPTKEKFIQAKYSAKRFIFKPKQDCQAPSVASQIW
DAVRANDKKMAYRLILNSNADVNTTYEQARANDPSSMSKATIMRREFTTPQNNSAAGSGH
IQLLDSPTTSTSSITDSDDLSEADEGLQQCSLLHLACYFGDLGMLELLLQYGANANVPDH
CGRTPLHLCISGRKHLFSKLLITRGANTRALDGDGKTPLQRAMEMGMSMDDELIAFLSEN
NRQSL
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcgggaagctggacgattcgcccatgttccgtagtcagctacaaacattagaa
gaaagtgcagaggcacttagagagcggagtcaaaaattttacaaaggatgtcgaaaatat
acggaaggattgggagaagcatatgatgaagatattgcatttgcaagtgctcttgaaatg
tttggaggaggacataatgatccgattggtatagcttttggagggcctgtgatgactaaa
tataccattgctttgcgagaaattgggacatataaagaacaacttcgctcccaggtagaa
caaatcttgaatgaacggctgatacactttgtgaatattgatttacatgatgtgaaggag
attcggaagcgctttgacaaagctagtcttcattatgatcaggctcgtgagaagtacctt
tccttgagcaaaagtacaaaaatggatattgttgcagaatctgaagaggaactacgccat
gcaaggtcagcatttgagcaagctcgcttcaacctagtgagcactctttcaaatattgag
gccaagaaaaagtttgaattcttggaggcagttagtggaacaatggatgctcatctgcgt
tattttaagcagggttatgagttgctgcaccagatggagccatatattcaccaggtattg
gcatatgcacaacaatcaagagacaggacaaattatgagcaagcagctcttgcagagcga
atgcaggaatttaagaggcaaatagatcgtgaaagtcgatgttctttcagtgacacagat
aattctccaacaggggatggtatacaggctgttggaagaagctcacacaagatgattgaa
gctgcaatgcaatcaactgcaaagggaaaggtccaaacaattaggcaaggttacctttcc
aagcgttcttcaaatttaaggggtgactggaagagaagattctttgttctcgatagccgt
ggaatgttgtactattaccgcaaacaacactggagcaagcaaacgggtaatgcctgccag
cattctcttaagaaaggtcatcatgcaactgatcacgtatctggtttattcggtcggttg
ctttactctcatcaccatggaccatcacaagatgagaggtctgttgcacaccatactgtt
aatctacttacttcaactattaaggtggatgcagaacaaactgatctgcggttttgtttc
acgatagtttctccgagaaagaaatacactctccaggcagagaatacaatggatcgtatg
gactggattgaaaaaataacaggagtaattgcttcacttttgagttctcagttaccagat
cagaggcttcactttagtccaatgagcagtgggcatcatcgcactgcaagcgagagtagc
tccttgtgcagctcttctgattttgaccataccatacctgatgaaaatggattgcaaagg
tgttctgctgcaggtttttgtgatcattctggtagaggtttgcatgggtgcaggacacat
ggaaagcaggaaagtcctcttgaattgttaaggaaagttcctggaaatgatgtatgtgca
gattgtggttcttctgaaccagattgggcctcgctgaatctgggtattttgctctgcatc
gaatgctctggggttcaccgcaaccttggtgtacacatctccaaggttagatctctaact
cttgatgtaaaagtttgggagccttctgttctcaatttgttccaatctcttggtaacaca
tatgctaactcattgtgggaggagcttctagaatctggaaaacatgcaagaggtgatggc
atctgcggcagacaaggtgatttcgaggaagaaacacattgcatgcccttcaggaagcct
aattacagagatacacttcccacaaaggagaagtttatccaggcaaagtattctgcgaaa
agatttatattcaagccaaagcaggactgtcaggcaccatcggttgctagtcaaatatgg
gatgctgtccgagctaatgacaagaagatggcatatcgtcttattttgaattccaatgct
gatgttaatacaacatatgagcaggctagggcaaatgatccctcaagtatgtcaaaagct
acaataatgagaagggaattcaccactccgcaaaacaattctgctgctggtagtgggcac
atacaacttttggattcaccaacaactagcacaagttcaataactgacagtgatgattta
agtgaagcagatgagggtctacaacagtgctccttgttacatctagcatgctactttggt
gacttaggcatgctagagcttcttttgcagtatggtgccaatgcaaatgttcctgaccat
tgtggaagaacacctcttcatctttgtatctctggcaggaagcacttattttcaaagttg
ctgattactaggggtgccaatacaagagctttggatggagatggtaaaaccccattacaa
agagcaatggaaatgggtatgtctatggatgacgaacttattgctttcttgtctgaaaat
aacagacagtctctttga
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