Cryptomeria japonica (Japanese cedar): 131077813
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Entry
131077813 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131077813
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131077813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131077813
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131077813
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Utp12
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_Aladin
NBCH_WD40
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_TEP1_C
ASA1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_WDR19_1st
WDR54
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_HPS5
TRM82_WD
PALB2_WD40
Beta-prop_EIPR1
Beta-prop_RIG_1st
PAC11
PROPPIN
Nucleoporin_N
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Adeno_knob
CXCXC
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
131077813
NCBI-ProteinID:
XP_057871361
LinkDB
All DBs
Position
10:227172553..227247564
Genome browser
AA seq
955 aa
AA seq
DB search
MVKAYLRYEAASVFGVVTSHESNITFDNSGKLILCGALEQLIIWNVKKGECANKLMQTSA
NTGAQPAVTSIVCMPSSNSTVASGYADGSIRIWDAVKGTCETTLNGHKGAISVLCYSKTG
YLLASGSKDTDIVIWDAVGEAGLFRLRGHRDQVTDLVFLEGDKRLVSSSKDNLMRVWDLD
TQYCMQIISGHHSEIWSICVDPEERFLVTGSADHELRVYNIHQEMHKEQSIANEPKDSNL
ENDDSHILKQSKWEVLTYLGGIKRQNKDRVVTIRFNSTGSLLACQIAGKVVEIFRVLSEK
EALKKVKRKSRRKREKALKKAGTEVVNNEGSDPVENVENDFGGKSASDVFQFVQILRAKH
KIRSISFCPIPPKKGIKATIAVSLHNNALEVYEVGEESSVQIHAIHLPGHASDIRSLTLS
SDNSLLMSTSHNSVKIWNPSTCSCLRTMEAGYGLCSSFVPGNRYAVVGTKAGTVEIFDIG
AGERSNVIEAHSGSVWSLVPMVDGSGFITGSADHDVKFWEYQLVQESDQASQWLTARNVR
TLKMTEDVLMVRLSPTGKHIAVALLDSTIKVFFVDTLKFFLSLYGHKLPVLCMDISSDGD
LLVSGSADKNLKIWGLDFGDCHKSLFAHADSVMAVQFVRNTHYMFSVGKDRLVKYWDADK
FELLLTLEGHHAEVWCLVVSSHGDFIVTGSHDRSVRRWDRTEEPFFIEEEREKRLENMFE
SGLDDTVDGQFGLREDIPEEGAVGMAGKRTQETVTATDSVIEALDTSEVETERLCQHEEE
MKNGLTTQFQPNIMMRGLSPSAYVLRAVSVVRTNDLEQTLLALPFTDALKLFSYMEEWIS
DGDKVELVCRIATLLLQIHHQQLVSTPAARSVLTTLQGILRSRVKGCKDVLGFNLAAMDH
LKQLMAARSDAPFKNVTSKLMDIRARLSKKIDGKIKSDDKPHKKQKRFHRIQLGA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagcttatttgagatacgaggcagcaagcgtttttggggttgtgacgtctcac
gaatctaacatcacctttgataatagcggaaaactaatattatgcggtgcattggagcag
ctgattatatggaatgtcaagaagggtgaatgcgcaaataagcttatgcagacttctgca
aacaccggggcacaacctgctgttacttctattgtctgcatgccttcttccaactctacg
gttgccagtggatatgctgatggcagtataagaatatgggatgcagttaaaggtacttgt
gaaactactttgaatgggcataaaggagccattagtgtgctatgctatagcaaaacaggt
tacttgcttgcatcgggaagcaaagacacagacattgtcatatgggatgcagttggtgaa
gcaggactttttcgtcttcgtggtcatcgagatcaggtgacagatctggtttttctagaa
ggtgacaaaaggcttgtaagttcttccaaggacaatttaatgcgggtttgggatcttgat
actcaatactgcatgcaaattatttctggtcatcatagtgaaatctggtctatatgtgtg
gatcctgaggagcgcttccttgtcactggctcagctgatcatgaactacgtgtttataat
atccatcaagaaatgcataaagaacagagtattgccaatgaacctaaggattctaatcta
gagaatgatgatagtcacattctgaaacaaagtaagtgggaagtcttgacttatcttgga
ggcattaagaggcaaaataaggacagggttgtaacaataagatttaatagtactgggtca
cttcttgcctgccagatagctgggaaggtggttgaaatattccgcgttttgagtgaaaaa
gaggcattgaagaaagtaaaacgaaaaagtcgtagaaagcgtgaaaaggctctgaagaaa
gctggtacagaagtagttaacaatgaaggcagtgatcctgtggagaatgtagaaaatgat
tttggtggcaagtctgcttctgatgttttccagtttgttcaaattctacgagcaaaacat
aaaatccgttcaatttctttttgtcccattccaccaaagaaagggattaaagctaccata
gcagtatctcttcacaacaatgcattggaagtttatgaggttggtgaagagtcatcagta
caaatacatgccattcatcttccagggcatgcatctgacataaggagtcttacattgagc
tctgacaactcgttacttatgtcaactagccataattcagtgaaaatttggaacccaagc
acttgttcctgcctgcgtacaatggaagcaggttatggactttgtagctcttttgtccct
gggaatcggtatgcagttgttggtacaaaagctggaacagtggaaatatttgacatcgga
gctggtgaacgatccaatgttatagaagctcactcaggatctgtttggtctcttgtgcca
atggtagatgggtctgggttcataactggaagtgcagatcatgatgttaaattttgggaa
tatcaacttgtgcaagaaagtgatcaggcctcacagtggctaactgcacggaatgtaagg
actttgaaaatgacagaagatgtactcatggttaggcttagtcccactggcaaacacatt
gctgttgctttgttagactctacaatcaaggtgttttttgttgatactttgaagtttttc
ttgtctctctatggccacaaattgcctgttctttgcatggatatttcttcagatggtgat
ctgcttgtcagtggttcagcagacaaaaatttgaagatctgggggcttgattttggtgat
tgccataaatctctttttgctcatgctgacagtgtcatggcagttcagtttgtgcgcaac
acacactatatgttcagtgtaggaaaagatcgactagtgaagtattgggatgcagataag
tttgaattgctattgacattggaagggcatcatgctgaagtttggtgccttgtagttagc
agtcatggtgactttattgtaactggttctcatgatcgttctgttcggcggtgggaccgt
actgaagaaccttttttcattgaggaagagagagaaaagaggttggagaacatgtttgag
tcaggcttggatgatactgttgatggtcagtttggactaagagaagacattccagaggaa
ggggctgttgggatggcagggaaaagaacacaggagacagttactgcaacagattctgtg
attgaagcattagacacatcagaagttgaaactgagcgtctttgtcagcatgaggaagaa
atgaagaatggattgacgacacaatttcaaccaaacataatgatgcgtggtctttctcca
tctgcttatgttctacgagcagtctctgttgttcggactaatgatcttgaacaaaccctt
ttggctttaccctttacagatgctttgaaactcttctcatacatggaggaatggatatct
gatggtgataaggttgagcttgtttgtcgcattgctacattgctgcttcaaatacatcat
cagcaacttgtttccactcctgcagctagatctgtcttgaccactctacaaggaattctt
cgcagcagggtgaagggctgcaaagatgtactaggtttcaatcttgcagcaatggatcac
ctcaagcaattaatggcagcaaggtctgatgccccctttaagaatgtgacgtcaaagctt
atggatattcgtgctcgtctttctaaaaaaatagatgggaagataaaatcagatgataaa
ccacacaagaagcagaaaaggtttcataggatacaacttggagcataa
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