Cryptomeria japonica (Japanese cedar): 131077967
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Entry
131077967 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131077967 isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131077967
Membrane trafficking [BR:
cjf04131
]
Protein recycling
Others
Retriever complex
131077967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
131077967
NCBI-ProteinID:
XP_057871562
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Position
6:complement(343645416..343941957)
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AA seq
945 aa
AA seq
DB search
MEFRLRMSREEESAYCLGRKAANNHPLLNSSASSITPTTIITGAASKSNFAVDSSLQFDD
AESGKRVFIDPLSEFISKSPPSVAKKSERLLDKTIIRGASDEAVETALKEWSIYKTLMMH
KYTCANTITLSATSDFIAKSIKAGGKSSTTMHLEELDNPEKNAEEEVKIISQQEYVRRLC
ELNDEIAQAWQQNERVIALRLSIKVARLLSDTSVPQFYPTLFVLVTDIMDTLGSLVWKRI
KMKAEFDDEGNLIRPLPQNFTCNDVPYEAKDTCNNWFYKIASIQELLPRIYLEMAILRCW
HFLEENPLHVCQRLAMMIRGIADPLSSAFARLYLARAAKTLIPYETGFLITSLGDYTAIF
QRVLSGNLSIKWIKSYSEKKMYARLVQPVIEWIVKCIFYHADQEKTIHLLRCFGIQKNDC
NQIQNIHLLSVGVHYFLKQLPASVVSNYAMVLLKLVENAVDHSMAQYMNYRLLGFKLCEC
GPPREFCHAILSDVLEVITQYSDLKEHLMVMDVYVDFILQNSMENELGIVLDNIFDHVKR
TGINDTELVSLESVILKLISHFTDITCILSLDHFVDILDVLYGSTRVSVYKNILIHISRN
NQTVQDPVTRKILFDVCKVLHDSIDSLTSDDDCRQIAHLVTRFVQLVDFAGDSEKHLSFL
IDCRATFGKMDPLKEALSHSSNYLASRTSKMVKEYHQRQVTDFVKACVSFNEVTIPSIRS
ILKRLHLFLETAEVALQNALLSHTEGLLKTAISCLQEIQNIDDLKDRELGEGIVAFIQKL
SAFLIVLPGHPTQGAFYLLKGLLTLLDSQPWLIPGLTNIRAFSAIVSLTAALAQKELPYH
VGNKEVISNDELYHGESSYNAELVAISNVLVQKIIDSLNQAPNSYARANQALDICNFLLI
SFKANSEVVESCTNLIKIAESSSQANTRYLQLTTEFLYRCTQFQK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggaattcaggttgcggatgtccagagaggaagaaagcgcgtattgtcttggcaggaaa
gcagccaacaatcacccattactcaattccagtgctagttctataactcccactaccatt
atcaccggagctgcttccaaatctaatttcgcagttgactcctctttacagtttgatgat
gcagaatctgggaaaagggtcttcattgaccctcttagtgaatttatatcgaaatctcct
ccttcagttgccaagaaatcagaaaggcttttggataagacaataatacgaggagcctct
gatgaagctgtagaaactgctttgaaagaatggagtatttacaagacactcatgatgcat
aagtatacctgtgcaaacacaattactttatctgcaacatctgatttcatagccaaaagc
atcaaagcaggagggaaatcttcaacaactatgcatctagaagaactggacaatccagag
aagaacgcagaagaagaagttaaaattatttcacaacaagagtatgttaggcgcctgtgt
gagctgaatgatgaaatagctcaagcttggcaacaaaatgaacgtgttattgctctcaga
ttgtccattaaggttgcaaggctcttgtcagacacttcagtccctcaattttatcccacc
ttatttgttttggtcactgacataatggatacattgggaagtctggtttggaagcgcatc
aaaatgaaggcagaatttgatgacgagggaaatttgatacgacctttaccacaaaacttc
acatgcaatgatgttccatatgaggccaaagacacatgcaacaactggttttacaagatt
gcttctatccaagaacttcttccacgcatataccttgaaatggcaattttgcgttgctgg
cactttcttgaggaaaatccattgcatgtttgccaacgcttagctatgatgattagaggc
atagcagatcctttgtcatctgcatttgctcgtttatacttggcgcgtgctgcaaaaaca
ttaattccatatgaaacaggatttttgatcactagtcttggtgactatactgcaatattt
caaagggttctttctgggaatctaagcatcaagtggataaaatcttacagtgaaaagaag
atgtatgctcgcttggtgcaacctgtaattgaatggattgtaaaatgcattttctatcat
gcagatcaggagaagacgattcatcttctgagatgttttggtattcagaaaaatgattgc
aatcaaattcaaaacattcatctactttctgttggggtgcattattttctgaagcagcta
ccggcatcagttgttagtaattatgccatggtgctacttaagcttgtagaaaacgctgtg
gaccattcaatggcccagtacatgaattacaggttgcttggattcaaattatgtgagtgt
ggacctccaagagaattttgtcatgctatcttgagtgatgtgctggaggttatcacacaa
tattcagatctaaaggagcatttgatggttatggatgtgtatgtggacttcattcttcag
aatagcatggaaaatgaactcggcattgttttagataatatttttgatcacgtcaaaaga
actgggattaatgatacagagcttgtgagtttagaatcagtcattctgaagcttatttca
catttcactgacattacatgcattctttcattggatcattttgtggacattttggatgtt
ctttatggcagcacacgtgtttctgtctacaagaatattcttattcatatctctaggaat
aatcaaacagttcaagatcctgttacaaggaagattctctttgatgtttgcaaagttctt
catgattcaattgatagcttgaccagtgacgatgattgtaggcagattgcccatcttgta
acacgctttgtgcagctggttgattttgcaggagattcagagaaacatttatcttttctt
atagattgccgtgcaacctttggaaaaatggacccgttaaaggaagccttgtcacattca
agcaattatttagcttccagaacatcaaaaatggtaaaagaatatcatcaaaggcaagtc
actgattttgtaaaagcttgtgtttccttcaatgaagttaccataccttctattagaagc
attctgaagcggttacatctttttcttgaaactgccgaggtagcattgcagaatgcactt
ctttcacacactgaaggcctactgaaaacagcaataagctgtttgcaggagattcaaaat
atagatgacctcaaagacagagagttgggagaagggattgtggcattcattcagaaattg
tcagcattccttattgttcttccagggcaccccacacaaggagcattttatctgttgaaa
ggcctcttaacacttttggactctcaaccatggttgataccaggattgacaaacatcaga
gcattttctgcaattgtttctttaactgcggcattagctcagaaggagctaccttatcat
gttggaaacaaagaggttattagcaatgacgagttatatcacggagaatcatcctacaat
gcagaacttgtggccatttctaatgtcttagttcaaaaaatcatagacagcttaaatcaa
gcacccaactcatatgcacgagcaaatcaagcactagatatatgcaacttcttactcatt
tccttcaaggccaatagtgaagttgtagaatcttgtacaaatttgattaaaattgctgaa
tcatcatcacaagcaaataccagatatttacaattgaccacggaatttttatatagatgt
acacaattccaaaagtga
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