Cryptomeria japonica (Japanese cedar): 131078268
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Entry
131078268 CDS
T10556
Name
(RefSeq) coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131078268
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131078268
Membrane trafficking [BR:
cjf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
131078268
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
131078268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_HPS5
PEP5_VPS11_N
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
131078268
NCBI-ProteinID:
XP_057871916
LinkDB
All DBs
Position
7:152682676..152708283
Genome browser
AA seq
928 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWMLASLYSGSVCIWNYQSQTLAKSFEVTELPV
RSAKFIARKQWVVAGADDMIIRVYNYNTMDKVKVFEAHTDYIRCVTVHPTLPYVLSSSDD
MLIKLWDWDKGWQCTQIFEGHSHYVMQVAFNPKDTNTFASASLDRTIKIWSLGSLEPNFT
LDAHTKGVNCVDYFTGGDRPYLISGSDDHTAKVWDYQTKSCIQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYSKGSNRVAIGYDEGTIMIKIG
REEPVASMDSSGKIIWAKHNEIQTVNIKAVGADIEVTDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWASDGEYAVRESTSKIKIFSKTFQ
ERKSIRPTFSAESIYGGALLAICSNDFVCFYDWAECRVIRRIDVTVKNIYWADSGDLVAI
ASDNSFYILKYNRDVVSSCLDTGKPIDEQGVEDAFELVHEISERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLDRANEVLPTIPREHLNSVGRFLESRGMLEEALEVSTDPDYKFDLAVQLGRIEVAKA
IAVEAQSESKWKQLGELAMSSGKLDMAEECLSHASDLSGLLLLYSSMGDADGMARLATLA
RDQGKNNVTFLCLFLLGKVEECIQLLVESNRIPEAAFMARSYLPSKVSEIASTWRDDLSK
VNQKAAESLADPKDYPNLFDDWHLALSVESQLKESRNGFPPAEDYPKYMHTRNTDLIQEF
RNLHIDGEAPLENGDSVHEVIDTHEDYVPGVSLNETIEDYVRDETQEETIDGEKYVEAEG
STEGEVLVNGNEAEEEEWGMDNEGNQPA
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcggcttgagatcaagaggaagcttgctcaaagatctgaacgtgtgaaatca
gtagatcttcatccaacagagccatggatgcttgcaagtctgtattctggaagtgtatgc
atttggaattaccagtcacagactttggcaaagtcctttgaagtcacggagcttccagta
cggtctgccaagtttatagcccggaagcagtgggttgtggctggtgcagatgacatgatt
attcgagtatacaattataacaccatggacaaggtaaaagtatttgaagcacatactgac
tatatcaggtgtgtcacagttcatccaaccctgccctatgttctgtcatcatcggatgac
atgctaatcaagctttgggactgggataaaggttggcaatgcacacaaatatttgaaggg
cattcacattatgtgatgcaagttgcctttaatcccaaggacacaaatacatttgcgagt
gcctcactggatcgcactataaagatatggagtcttggctcgctagaaccaaattttaca
cttgatgcccatacaaagggtgtaaattgtgttgattactttacgggaggtgacagaccg
tatctgatttcaggttcagatgatcatacagcaaaggtgtgggactatcagacaaaaagc
tgtatccagactcttgaaggacatacacataatgtctcagcagtttgtttccatcctgaa
cttcctatcattatcactggctcagaagatggtaccgtacgcatttggcattcaacaaca
tacaggctagaaaacactttgaattatgggctagaacgtgtatgggcgatcggctattct
aaaggatcaaatcgggttgctattgggtacgatgaaggcacaatcatgatcaaaattggt
cgagaggagccagttgctagtatggacagtagtggaaaaataatttgggcaaagcacaat
gagatacagactgtaaatattaaggcagttggagcagacattgaggtgacagatggggag
agattgccattagctgtcaaggaattgggtagctgtgatttatatccacagagcttaaaa
cacaatccaaatggaaggtttgttgtggtttgtggtgatggagagtatattatttatact
gcccttgcatggaggaataggtcttttggatctgcccttgagtttgtttgggcatcagat
ggagaatatgcagttcgagaaagtacatccaagattaaaattttcagtaaaacatttcag
gagaggaaaagtattcgtccaactttttctgctgagtctatctatggtggagccttgttg
gctatatgttcgaatgattttgtttgcttctatgattgggctgaatgccgtgtaattcgg
cggattgatgttactgtgaaaaatatttactgggctgatagtggagatctggttgcaatt
gccagtgacaattcgttctatattctgaaatacaatcgtgatgttgtttcttcatgcttg
gatactggtaagcctattgatgagcagggggtagaggatgcttttgaacttgtacatgag
ataagtgagcgggttaggactggaatatgggttggtgattgttttatatacaataactca
tcttggcgtctcaattattgtgttggtggcgaggtaacaaccatgtttcacttagatcgg
cctatgtatttgttaggctatctcgcgagtcagagtagggtatatcttattgacaaagag
ttcaatgtgatgggctatacattactgcttagtttgatagagtataagacacttgttatg
cggggcgaccttgatagggcaaatgaagttttacctacaattcctcgggagcatctgaac
agtgtgggtcgatttttggagtcacgaggcatgttagaggaagcgcttgaagtgtctaca
gacccggactacaaatttgatctggcagtacagcttggaaggattgaagtagcaaaggca
attgctgttgaagcacagagtgaatcaaaatggaaacaattaggagaactagccatgtct
tctggaaagttagacatggctgaagaatgcctaagccatgcatcagacctaagtggattg
ttgcttctctactcgtcaatgggagatgcagatgggatggccagacttgctactcttgcc
agagaccaggggaaaaacaatgttacatttctttgtttgttcctgctgggtaaagtagaa
gaatgtatccagctattggtggaaagcaatcgcataccagaagctgcttttatggcaaga
tcctatctgccaagcaaggtttcagaaattgcttccacttggcgtgatgaccttagtaag
gtaaatcaaaaagctgcagagtcgttagcagatccaaaggactaccctaatctttttgat
gactggcatttggcgctctctgttgaatctcaactaaaggagtcaaggaatggctttcct
cctgcagaggattatccaaaatatatgcatacaaggaatacagaccttattcaggagttc
agaaatttgcatattgatggggaagcacctctagaaaatggagattctgttcatgaggta
atagacacccatgaagattatgttcctggtgtctctctcaatgaaacaattgaagattat
gttcgtgatgaaacccaagaagaaacaattgatggagagaagtatgtagaagcagaagga
tctacagaaggagaggtgcttgttaatggaaatgaagcagaagaagaagagtggggtatg
gacaatgaaggaaaccagccagcatga
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