KEGG   Cryptomeria japonica (Japanese cedar): 131078812
Entry
131078812         CDS       T10556                                 
Name
(RefSeq) uncharacterized protein LOC131078812
  KO
K12857  Prp8 binding protein
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131078812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131078812
Spliceosome [BR:cjf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    131078812
 Complex C
   U5 SnRNP specific factors
    131078812
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st eIF2A Beta-prop_WDR75_2nd Beta-prop_HPS5 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_DCAF12 RMC1_N Beta-prop_IFT140_2nd PEP5_VPS11_N Nbas_N
Other DBs
NCBI-GeneID: 131078812
NCBI-ProteinID: XP_057872563
LinkDB
Position
2:complement(88248374..88269995)
AA seq 359 aa
MLGTKRPLDEPMMIVKRPKTDLSAFSYGIQTSNQIGVRKDGPRRTSSLESPIMALTGHQG
AIYTLKFNPLGTVVASGSHDREIFLWNVYGECKSFMVLKGHKNAVLDLHWTSDGSQIISA
SPDKTLRAWDADTGMQIKKMSEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRLRGAI
QTFPDKYQITAVGFSDSADKIFSGGIDNEIKVWDLRRNEVTMRLQGHTDTITGMQLSPDG
SYLLTNSMDCSLRIWDMRPYAPQNRCVKILTGHQHNFEKNLLKCSWSSDGSKVTAGSADR
MVYIWDTTSRRILYKLPGHNGSVNECVFHPTEPIIGSCSSDKQIYLGEIETNVGYQAPM
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgcttggtacaaagagaccactagacgagcctatgatgatagtgaaacgaccaaaaaca
gatctgtcagccttctcatatggtatccaaacatccaatcagattggagttcgtaaggat
gggcctcgaagaacgtccagcttggaatctcctatcatggcgttgactgggcaccaaggt
gcgatatatacattgaaattcaatccattgggaactgtggttgcatctggatcacatgac
agggagattttcttgtggaacgtgtatggagagtgcaagagttttatggttttgaaaggt
cacaaaaatgcagtactggatctccactggactagtgatggtagtcaaatcatatcagca
agccctgataagactctacgagcttgggatgcagatacaggcatgcaaataaagaaaatg
tcagagcactcgtcatttgttaattcatgttgcccctcacgtaggggccctcctcttgtg
gtgagtggctctgatgatggtacagcaaagttatgggatttgcgtctcagaggagctatt
cagacgtttccagacaaataccaaatcactgctgttggattctctgattctgcagacaag
atattttctggtggaattgacaatgagattaaggtgtgggacctgcgaagaaatgaggta
accatgcggctccaaggccacacagacacaattacaggtatgcagttgagccctgatgga
tcatatctcctgacaaattccatggactgttctcttcgtatttgggatatgcgaccatat
gccccacaaaatcgatgtgtaaagatcctgacaggccaccaacacaactttgaaaagaac
ctcctgaaatgtagttggtcctcagatggaagtaaggtcacagctgggagtgcagatcgt
atggtctatatatgggataccacatctcgtcgtatcttgtacaagctcccaggtcacaat
ggttctgtaaatgagtgtgttttccatcccacagagccaattattggatcctgtagtagt
gacaagcagatttacttaggagagatcgagactaatgtaggatatcaggctcctatgtaa

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