Cryptomeria japonica (Japanese cedar): 131078859
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Entry
131078859 CDS
T10556
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03022
Basal transcription factors
Brite
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131078859
Coactivators
SAGA/TFTC/STAGA complex
131078859
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
131078859
STAGA complex
131078859
TFTC complex
131078859
SAGA complex
131078859
SLIK complex
131078859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131078859
NCBI-ProteinID:
XP_057872656
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Position
2:complement(79958214..79992584)
Genome browser
AA seq
561 aa
AA seq
DB search
MGFLPNDTIEVIAQSIGINNLSPDVAQALAPDVEYRLREIMQEAVKCQRHSKRTILTTED
VDSALSLRNVEPIYGFASEDPLKFKKALGHADLFYIEDKDLEFKDVVEAPLPKTPLETAV
VVHWLAIEGVQPAIPENPTSGALVVPSENKKTEHDKDHGLPIDVKLPVKHVLSRELQLYF
EKITELIVTQAGSTLFKEALVSLSTDSGLHPLVPYFTQFIADEVTRSLGDCTLLFALMRV
VRSLLHNSHIHIEPHLHQLMPSVITCLVAKRLGTRFTQNHWELRDSTAYLVAFICRRFGH
VYHNLQPRVTRTLLHAFLDPKKALTQHYGAIQGLAAMGPSVVRLLILPNLEPYLKLLEPE
MVLESQKNEIKRHEAWRVYGALLQAAGRCIFERVKLFPGLLSLPVHSTLESSIKVATTFD
PDTAKGIVSPGNLSSTLRKRKASEVFSSQHSSKKTATDGSVASFSTESLPDSIGATSEGQ
AVVKLGESTLVKVTGQNSDENVTGNSRREKGLLNKSERAGSVLAQAWKEDADAGQLLASL
VDLFGEGMLMFFASSDMSLFL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcttccaaatgatacaatagaagtgatagctcaaagcattggtataaacaat
ttgtctccagatgttgcccaagctcttgctccagatgttgaatatagattgcgtgaaatt
atgcaggaagctgtcaaatgtcagaggcattcaaagcgaactattttgactactgaggat
gtggatagtgcactcagcctcagaaatgtggagcccatttatggctttgcttcggaagat
cctttgaaatttaaaaaggcacttgggcatgcagatctattttatattgaggataaagac
ttggaatttaaggatgttgttgaagcacctctaccaaaaacaccactggaaactgcagtg
gtagtccactggctggccattgaaggagtgcagccagccattcctgaaaatcctacatct
ggagcgcttgtagttccttcagaaaataagaagactgaacacgacaaggatcatggcctt
cctattgatgtgaaacttcctgttaaacatgtcttatcaagagaactccagctatacttt
gagaaaattaccgaactcattgttacacaagctggctctaccttattcaaggaagcattg
gttagtttgtctacagattctggacttcatccattggtcccatatttcactcagttcatt
gcagatgaggtaaccaggagtttgggcgattgtactcttctttttgcattgatgcgtgtg
gtgcggagccttttacacaattcacacatacacattgagcctcatttgcatcagcttatg
ccctctgtcattacgtgcctcgttgccaaaagattaggaacacgattcactcaaaaccat
tgggagcttagagattccacagcatatctggttgcatttatatgcagacgatttggtcat
gtgtaccacaatcttcaaccacgggtgacaaggactcttcttcatgcattccttgatcct
aagaaggcattgacgcaacactatggtgctattcaaggccttgcagctatgggacctagc
gtggtgcgcttactgatattgccaaatttggaaccttacttaaaactactagaaccagag
atggtacttgagagtcagaaaaatgaaatcaagcgtcacgaagcttggcgtgtgtatggt
gctttattgcaagctgcaggtcgatgcatatttgagagggtaaaattgtttccaggtctt
ctatctttacctgtccattctacactagagagttctataaaagtggcgacaacatttgat
cctgatacagctaaaggcattgtttctccaggaaatctgtcaagcacattaagaaagcgt
aaagctagtgaagttttttcttcacaacattcgtcaaagaaaacagctactgatggatct
gttgctagcttttcaactgaatctttgcctgattctattggagcaacatctgaaggtcag
gccgttgtcaaactaggagagtcgactctggttaaggtcactggacaaaattctgatgaa
aatgtaacaggtaacagtagaagggaaaagggattgctgaacaagagtgaaagggctggg
agtgttcttgctcaggcgtggaaagaagatgctgatgcagggcaactattagcctctctt
gttgatttgtttggggaaggcatgctaatgttctttgcttcaagcgacatgtcgcttttc
ttgtaa
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