Cryptomeria japonica (Japanese cedar): 131078966
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Entry
131078966 CDS
T10556
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131078966
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131078966
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
COP-gamma_platf
Motif
Other DBs
NCBI-GeneID:
131078966
NCBI-ProteinID:
XP_057872806
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Position
10:complement(308530116..308534887)
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AA seq
514 aa
AA seq
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MGIHHNLKSVSFVQFLMGYCLLHGFLSASAHHDPVDILSRLNLEYNESMEVDDYRIYIAQ
ELGSVKDFLEKAASQVNYNGSSCKKSISVGLSSTPWVQALVLNDSFGDAIKQLDQITTIL
SSCPEVEISEAVLDFAQQAYKHVVKASVLLGNLQELISSNTLLNRSQQRYYREDKSQGCV
VDGTKCQYSKCGKGKLLLNCATGFAAGVIGGAQGTFYTVNNSQDNPQHPIPGTLRYAVNL
AASITKGVWIKFSEDLVICLKEMLWIKSHTTIDGRGFNVTITCKNIVLAGIHNVILHNFQ
ISGITKTDTVHIFSGTTMVWVDHLTSFDAKLGLVSVVEGSTDVTISNCDLSNKNFNMLLG
ASDSDTVDQKLRVTVFRNWFRNSRQRMPHCRWGYCHVVNNLYNNWGYYAIGGRAHAKVYS
EKNVFCAGHHQEVTPWFKGHSSSFDTTATIQSTGDLFLNGATFHQFLGFGSLTPPTYTHH
RDYPPTHPTTSLVNLVQHCSGALFGPKLDECLRI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggtatccatcacaatcttaaatcagtttcttttgttcaattcttgatgggctattgc
ctcctccatggatttctcagtgcatctgcccaccatgatcctgtagatatattaagcagg
ttaaatcttgaatataatgagagtatggaagtggatgattacaggatttatattgctcag
gagttgggaagtgtgaaggattttttagaaaaagctgcttcacaggtgaattataatggt
agctcatgcaagaagtctatcagtgtgggcttgagttctacaccatgggtacaggctctt
gtgcttaatgacagttttggggatgccatcaagcagcttgatcagatcaccaccattctg
tcaagctgtccagaagttgaaatttctgaggctgtgcttgactttgcccagcaagcctat
aaacatgttgtgaaggcctctgtattgctagggaatcttcaagaacttataagcagtaat
actctgttaaataggagccagcagagatactatagagaagacaaaagccaaggatgtgta
gtggacggcaccaagtgccaatactccaaatgtggaaagggaaaattgctactcaactgt
gccactggatttgcagcaggtgtgataggcggtgcacaaggaacattctacacagtcaat
aattcccaagacaacccacaacaccctatcccaggcacattgcgctacgctgtcaattta
gcagcctcaattacaaaaggtgtatggatcaaattctcagaggacctggtcatctgcctc
aaagaaatgctgtggatcaagagccacaccacaattgatggccggggctttaatgttacc
atcacttgcaagaacatagttcttgctggcattcataacgtcattctccacaactttcag
atcagtggaatcacaaagactgatacagttcatatattttctggaacaaccatggtgtgg
gtcgatcacttgacttcctttgatgctaaattaggattggtctcagtggttgaaggatcc
acagatgtaaccatctccaactgtgatctttctaataagaatttcaatatgctgttgggt
gcctcggattcggacacagttgatcagaagcttagagttactgtcttcagaaattggttc
aggaatagcaggcagcgcatgcctcattgcagatggggatactgccatgttgtgaacaat
ctatacaataactggggatactatgcaattggaggaagagcccatgccaaggtatattca
gaaaagaatgtgttctgtgcaggccatcatcaggaggtcacaccatggttcaaaggacac
agttctagctttgacacaactgccaccattcagtctacaggtgatctatttctgaatggt
gcaacattccaccaattcctcggctttggcagtcttacacctcccacttacacccatcat
agggactaccctcctacccatcccacaacaagtcttgtaaaccttgttcaacattgctct
ggagctctctttggcccaaagcttgatgaatgcctcaggatataa
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