Cryptomeria japonica (Japanese cedar): 131079161
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Entry
131079161 CDS
T10556
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjf01009
]
131079161
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131079161
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjf04040
]
131079161
Protein phosphatases and associated proteins [BR:
cjf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131079161
Membrane trafficking [BR:
cjf04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
131079161
Ion channels [BR:
cjf04040
]
Chloride channels
Chloride channel (CLC)
131079161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
131079161
NCBI-ProteinID:
XP_057873050
LinkDB
All DBs
Position
10:188330460..188336013
Genome browser
AA seq
775 aa
AA seq
DB search
MDERDSEGEKLSEMEIGLKRPLLRKRGAGIGLIPNSSSQMALVGSQVSPLESLDYEVIEN
DLFKQDWRSKTKVEIFHYIVLKWTLVFLIGLFVGLIAAFINLAVENIAGMKLLIASKLVL
QQRYLLAFAIFTAANLLLVLCAAVLTAYVAPTAAGAGVPEIKAYLNGVDLPGFLGPSTLF
VKVFGSICATSAGLDLGKEGPLIHTGSCIASLMGQGGSRRYHLTWRWLRFFKNDRDRRDL
ITCGAAAGVAAAFRAPIGGVLFALEEIATWWRSALLWRTFFTTAVVAVVLRAFIDYCGSG
NCGLFGGGGLIMFDVSSVTIKYRPIDLLPVVILGVVGGVVGAVYNYLLEHTLRIYALINQ
RGPISKILLSCAVSLYTSCCIFGLPWLVACKPCPEGKMLDHECPNVRRTGNFKRFHCPEG
HYNDLATLLFNTNDAAVRSIFSSGTGNEFQLTSLLLYFIAIFILGLVTYGLALPSGLFIP
LILIGSTYGRALGEMMGSFANIDQGLFAVLGAASLLGGSMRMTVSLCVILLELTNNLSLL
PSIMIELLISKTIADCFNSSVYDKIVHLKGLPFLEAHPEPFMSQLTAGDAVIGPLVTLHR
IEKVGNVVQILKNTKHNAFPVIDEPPNSETPVLRGLVLRSHLLVLLKKKDFHISEQDAVV
SAGLNQNLSSEDFAKPGSGKGLKIEEIEVSAEKEEMYMDLHTVINTSPYTVVETMSLAKA
LILFRHLGLRHLCVVPKETERAPIVGILTRHDFMPAHILARHPHLQERKTKRLGI
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagggattcagaaggcgagaaactttcagaaatggaaattgggttaaaaagg
cctcttctcagaaaacgaggagctggtattggattgattccaaattctagttcacagatg
gcccttgtgggctctcaagtttctccattggagagcttagattatgaagtgatagaaaat
gatcttttcaagcaggactggagatcgaagacaaaggttgaaatatttcactacatagtc
cttaaatggacactggtctttttgattggtttattcgttgggcttattgcagcctttatc
aatctagcagtagagaacattgcagggatgaagctgctaattgcttctaagctggtgttg
caacaaaggtatctcctagcgtttgcaatatttacagctgcgaatctactactggtttta
tgtgcagcagtgcttactgcttatgttgcaccaacagcagcaggggcgggtgtgccagag
attaaggcttatctcaatggtgtggatctcccaggattcttgggtcctagtacacttttt
gttaaggtgtttggtagtatttgtgctacttctgcgggattggatttaggaaaggaaggg
cctctgatccacactggatcgtgcatagcatccctgatgggacaggggggctcaagacgt
tatcatctcacatggagatggctgaggttcttcaaaaatgacagagacagaagagatctt
ataacatgtggcgctgctgcaggagtggctgcagctttccgtgcacccattggtggtgtg
ctctttgcgcttgaggaaatagcaacctggtggcgaagtgctcttctttggagaaccttt
ttcacaactgcagtggttgctgtagttctacgagcattcattgattattgtggaagtgga
aactgtgggctttttggaggtgggggactgataatgtttgatgtgagttcagtgactata
aaatatagacctattgatctacttcccgtagtgatactgggggtcgttggaggagtagtg
ggagcagtatataactaccttcttgagcatactctgagaatatatgccttaatcaatcag
agagggccaatatccaaaatacttctttcatgcgctgtgtctctgtatacatcctgttgt
atattcggacttccatggcttgtagcatgtaaaccttgtccagaaggaaagatgctcgac
catgaatgtcccaatgttcgcagaacagggaacttcaagcgattccattgccctgaaggc
cactacaatgaccttgcaactttgctgttcaacacaaatgatgctgctgttagaagtata
ttcagctctggcactggaaatgagtttcagttgacatcactgttgctctacttcattgca
attttcatattgggactagtaacatatggactggcacttccatcaggtctcttcatacct
ttaatcttaataggctctacatatggcagagcccttggtgagatgatgggatcatttgca
aacattgatcaaggactttttgctgtgcttggtgcagcctctcttctagggggctcaatg
agaatgacagtttcactttgtgtgatccttttggagctaacaaataacttatccttgctc
ccttcgattatgatagaactgttaatttcaaagacaatagctgattgcttcaacagcagt
gtctatgacaaaattgtgcacttgaaggggcttccattcttggaagcacatcctgaacca
tttatgagtcaactcactgcaggggatgctgtcataggtccattggtaacccttcacaga
atagagaaggttggaaacgttgtacagattttgaaaaacactaagcacaatgccttccca
gttatagatgaaccccctaactcagaaacgccagtcttgcgtggccttgtccttaggtca
cacctcttggtcttgttgaagaaaaaggacttccacatttctgagcaggatgcagttgtt
tctgcagggttgaaccagaacctttcttctgaagactttgcaaagccaggctcaggaaaa
ggtctcaagattgaagagattgaagtaagtgcagagaaagaggaaatgtatatggatttg
cacacagtcataaatacctcgccatacactgtagtggaaaccatgtcactggcaaaggca
ctcatactatttcggcatcttggcttgcgccatctatgtgtggtacccaaagaaactgag
agagctcccattgttggaatactgacaaggcatgattttatgcccgcacatattcttgct
cgccatcctcacctgcaagaaagaaaaacaaaaagattgggaatttag
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