Cryptomeria japonica (Japanese cedar): 131079884
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Entry
131079884 CDS
T10556
Name
(RefSeq) auxin response factor 4 isoform X1
KO
K14486
auxin response factor
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131079884
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
131079884
NCBI-ProteinID:
XP_057873909
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Position
10:complement(511842399..511912493)
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AA seq
915 aa
AA seq
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MEFSPPGLHQSPLPPSCYDGGDFGESAIAAAGMKSICPELWHACAGPLITLPPKGSHVVY
FPQGHLEQLTDNDGGIDKFSSGSFCRFATPVASMAAEEPAVASLNVASYRAQAVNQQMHS
YTLLPQILCRVLNVDLYQADQEMDEVYAQLTLFPESEESKKCAEELQPAPASTTPHMFCK
TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRR
HLLTTGWSLFVSYKRLVAGDAVLFLRDENGELRLGIRRASRQQSNVHSSVVSGQGMHSGV
LAAVAHAVATKSMFHIFYNPRRSPTEFVIPYSKYVKSFNYPLSTGMRFKMKFESEDATEK
RYTGTITEISDANPVRWPGSKWRPIKVRWDEHAAHERQERVSPWEIEPFNSTTGLNLPGP
RIKRLRTSFPSASTDLPIPDGDGLSDFGESSRFQKVLQGQEISPLTVPFRGDGKDLTKCQ
VWDYKALDDAREFSGGSRRTGHEIWPPSGRSRVSSSDLYYEKQKSGGLYGFEAMRSLDCP
FAERPDATQQHQRYIAQGRDNAISLPSNAVVPTALYSLPSSSLKLPQVNNSEMKLSLSSP
KSVIGACQKSDLCWEFWQPCSSGQSSSQTAVPKMEARQHASSSSPCLSEDTEGASREANF
SSEYPLRAPRQFSFEREKLALEISHSQKQNRSKVKGEQNCKLFGFSLPKVSACEDDAFNG
RVPKDVSSDGSHVSLDNAPFHAMHSKDHDHLEKTVQESCGHQETPRASDQEISSVTKVKN
SIQAYGRSCTKVHKQGNPVGRAVDLSKLHGYDELIHELEHLFSMDGLLSCPEKGWHVVYT
DNEGDMMLVGDDPWKEFCNIVCKILIYTQEEVQKLTPNIFSEDAQSCFEQQPTVLEVSKC
SIDGQDSSSPLLTGI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggagtttagcccacctgggttgcaccagtctcctcttcctccttcctgttatgatggt
ggggattttggtgagagtgcaattgcagcagcaggcatgaagtccatatgccctgagctt
tggcatgcctgtgccggtcctttgatcaccctgcctcccaagggcagccatgtcgtgtat
tttcctcagggccacttggaacagctcacagacaacgatggtggcatcgataaatttagc
tctggatccttttgcaggttcgccacacctgttgcatcaatggccgcggaagaaccagcc
gtggcatccttgaatgtggcgtcttatagagctcaggctgtcaaccaacaaatgcattca
tacacactcttaccccaaattttgtgtcgtgtgttgaatgtggatctatatcaggctgac
caggaaatggatgaagtctatgcacaattgacattatttccagaatctgaggaaagcaag
aaatgtgcagaagagctacagcctgcacccgcatccaccactcctcatatgttttgtaag
actctaacagcttctgatacaagcacccatggagggttttcagttcctcggagggctgca
gaggactgctttccaccacttgactacagccaacagcgaccttcccaagaacttgttgca
aaggatctacatggaagagaatggagatttcggcatatattcaggggtcagccacgcaga
catttgcttactactggatggagtctttttgtcagttacaaaaggctagttgctggagat
gctgtactctttctgcgagatgaaaatggagaattaaggttaggaattcgacgtgcttcc
cggcagcaaagtaatgtacattcttcagtggtttcaggacagggtatgcattcgggtgtg
ctagctgctgtagctcatgcagttgccacgaaaagcatgtttcacattttctataaccca
aggagaagtccaacagaatttgtgattccttattccaagtatgttaagagtttcaattat
ccattgtctactggaatgcgattcaaaatgaaatttgaatctgaagatgcaactgagaaa
aggtacactggtacgatcactgaaataagtgatgctaaccctgtgagatggcctggatca
aaatggagacccataaaggttaggtgggatgaacatgcggcacatgaaaggcaggaaaga
gtgtctccttgggaaattgagccatttaattccacaacagggttgaatctgcctggtcca
agaatcaaaagacttaggacaagttttccatcagcatcaacagatttgcctatcccggat
ggggatggtttatcagactttggagaatcttcaagattccaaaaggtcttgcaaggtcaa
gaaatttcacctctaacagtcccttttagaggtgatggaaaggatttgacgaaatgtcaa
gtttgggattataaggcactggatgatgcaagggaattctctggaggatcaaggaggact
ggacatgaaatctggcctccgtctggaagatctcgtgtttcctcttcagatttatactat
gaaaaacagaaatccggggggctatatggatttgaagctatgcgctccttagattgccca
tttgcagaaagaccagatgcaactcagcaacatcaaagatacattgcacaaggcagagac
aatgccatttcacttccttcaaatgcagtagttccgactgcactgtattctttgccttcc
tcctctcttaagttacctcaagtaaacaattcagaaatgaagctttctttatcatctcca
aaatctgtgataggtgcttgtcaaaaaagtgatttatgctgggagttctggcaaccttgt
tcttctggtcaaagttcatcacaaactgctgttcccaaaatggaagctcggcagcatgct
tcctcaagttctccttgcttgtcagaggacactgaaggtgcttcaagggaagcaaatttt
tcttcagagtatcctttaagggcaccgaggcagttctcatttgagcgagagaagcttgct
ttagaaatatctcattctcagaaacaaaacaggagcaaagtgaaaggagagcagaattgc
aaactctttggattttccttgcctaaggtttctgcttgtgaagatgatgctttcaatggt
agagttcctaaagatgttagttcagatggttcacatgtatcattggataatgcgcctttc
cacgcaatgcattccaaagaccatgaccatctagagaaaacggtacaagagtcatgcggt
catcaagaaactcccagagcctcagatcaagaaatatcttctgttaccaaagttaaaaat
tcaattcaagcttatgggcgcagttgtacaaaagttcataaacaagggaatcctgtagga
agggcagttgacctgtcaaaacttcatgggtatgatgagctgattcatgaactagagcac
cttttcagcatggatggtttattaagctgccctgaaaagggatggcatgttgtttacacg
gataatgaaggtgatatgatgcttgttggagatgatccctggaaggaattctgtaatata
gtctgcaaaatactgatatatactcaggaagaggtgcagaaattaacaccgaacatattt
agtgaagatgctcagagctgctttgagcagcagcctactgttctcgaggtttcaaagtgt
tcgattgatggacaggattcttcttccccgctcttaacaggaatctaa
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