Cryptomeria japonica (Japanese cedar): 131079971
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Entry
131079971 CDS
T10556
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1 isoform X1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131079971
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131079971
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
Helicases
131079971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
131079971
NCBI-ProteinID:
XP_057873998
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All DBs
Position
10:complement(366338867..366424452)
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AA seq
512 aa
AA seq
DB search
MEEPERKSEPVLPWMRQPVEVDSCEESPLELVPCLDPRLENALRNIGVKTLFPVQVAVWQ
ETIGPGAAERDLCICTPTGSGKTLAYALPIVQMLSTRTLQRLRALVVLPTRDLAIQVKAV
FDAIAPAVGLSVGLSIGQNPVAADAAQIVRHPRNFLGMFGESEDMDKNSIMSVDVLVATP
GKLMDHISGTKGFTLEYLRYLVVDETDRLLREAYQDWLPNVLSATKSNGHRDIRTSLGSI
TTLRRAGVERGFKDKTYPRVMKMILSATLTRDPSKLAQLALHQPLFLSLSSAKKRYILPE
QLENYIVTCESKLKPLYLLALLQCLQGEQTVVFTSSVVSTHRLSTLLNCFEGLSFRITEF
SREYHQSLRSKVLNSFREGNVQVLVASDVFTRGMDVEGVMNVVNYDMPKFTKTYVHRAGR
TARAGRSGRCFTLLLREEIKRFNKLLSKADNNNYSTYKLPEKSIEELHPFYFAALGKLKE
IVESETTGRDYSSHLIASKAEEWINNVDDRTM
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccgaaagaaagagcgaaccagtactgccatggatgcgacagccagtggag
gttgattcatgtgaagaatcaccattagagctggtcccttgcctggaccctcggctagaa
aatgctttgcggaatattggagtgaaaacactatttcctgtacaagtggcagtttggcaa
gagacaattggacctggtgctgcagaacgggatctatgtatttgtacaccaacaggaagt
gggaagactctagcatatgcattgcctattgttcagatgctttcaacacgcactttgcag
cgtcttcgagctctagttgtacttcctactcgtgaccttgcaatccaggtaaaggcagtc
tttgatgcaattgcaccagcagtgggtttatcagtaggcttgtctattggacagaatcca
gttgcagctgatgctgctcaaattgttagacatcctaggaatttcttgggaatgttcggt
gagtctgaggatatggataaaaattctatcatgtctgtagatgtgctagttgctacacct
ggaaagctgatggatcatatttcgggtacaaaggggttcactttagaatatcttcgctat
ttggtggttgatgaaactgataggctacttagggaagcatatcaagattggcttcctaat
gtacttagtgcaacaaaatcaaatggccatagagacattcgtacaagtctaggttccata
acaacccttagaagagctggcgtggaaagaggattcaaggataaaacttatcctagagtt
atgaagatgattttatctgctacactgactagagatcctagcaaacttgctcagcttgct
ctccatcagcccttgttcttgtctttaagcagtgctaaaaaacgctacatccttcctgaa
caacttgaaaattacatagtgacttgtgagtcaaagctgaaacctctgtatttactagcc
ttgctacagtgcttgcaaggggagcaaacggttgttttcacgtcttctgtggtttctacc
cataggttaagcacactacttaactgttttgagggcttgtcatttaggatcacggagttt
tcacgagaataccatcaatccttacgaagtaaagtgttgaactcattcagagagggaaat
gtgcaagtgcttgttgcttctgatgtctttacccgtgggatggatgtggaaggtgtgatg
aatgtggtcaattatgacatgcctaagtttacaaagacatatgttcaccgtgctggtcgt
actgccagggcagggcgctcaggacgctgttttaccttattgctgagggaggagatcaaa
cgcttcaacaagcttttaagtaaagctgataataataattacagcacttacaaactacca
gaaaaatcaatagaagaacttcatcctttctattttgcagcattgggaaaattgaaagaa
attgtggaatctgaaacaactggacgtgactattcttcacacttgatcgcaagtaaagct
gaagaatggattaacaatgtagatgacagaactatgtaa
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