Cryptomeria japonica (Japanese cedar): 131079993
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Entry
131079993 CDS
T10556
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131079993
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131079993
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131079993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
DUF2921
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
PHD_NSD
zf_RING_Vps8
zf-RING_16
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
131079993
NCBI-ProteinID:
XP_059074297
LinkDB
All DBs
Position
3:complement(354285548..354462890)
Genome browser
AA seq
565 aa
AA seq
DB search
MGATHQKQNGSWRRGYRCSAVLMLIMQFLLSWPLEAFRPLTDTSWGDQHLFSDRIENALG
PFSMWNISGTYRGTWGFQEAKNGSSRLPNFRKSSGQSVFELVSSPTKIYGVHYVQGAIVF
KDGSYIDEHDSQIIQMRMEGVYIWPFRQLRMVANSGTDGDNNQEELILSSPYHMLGIFSS
QVLQESPRDQFRRKGNNDVIADMERHCNLQIAAHISQISTNQKNEEHEHYHMEGVVESPM
IDDDGECFSPIILNATSINVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAK
VSLLMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAR
RPMNTGEVWETMRRELSVLYSHFYGVLLGGIIIMYEFHTFLRSILLVLYSFWLPQIITNI
IRDTRKPLHPHYIVGMTLTRLAVPLYAFGCPRNFMRVDIDIKWCICLTIFLGFQALILLL
QHYLGARWFIPRQILPEKYSYFRRADRDSNHVVDCVICMAAVDTVQRASECMITPCDHFF
HAGCLQRWMDIKMECPTCRRPLPPV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggggctactcatcagaagcagaatgggagctggagaagagggtatcggtgttctgca
gtgttgatgttgattatgcagtttttgttatcatggccgttggaagcgttcagacctctc
acagacacttcatggggagaccagcatctttttagtgacagaattgaaaatgctttgggg
ccattttcaatgtggaatatatctggtacctacagaggaacttggggattccaagaggca
aaaaatggttcatccagattgccaaacttcaggaaatctagtggccagtctgtttttgag
ttggttagttctcctacaaaaatatatggtgtacattatgtccaaggagccattgttttc
aaggacggctcatatatagatgaacatgattctcagataatacaaatgcgcatggaagga
gtatacatatggccatttagacaacttcggatggtggccaatagtggaacagatggggat
aacaaccaagaagaacttattctatctagcccatatcatatgcttggaatattttcctca
caagtcttgcaagagtctccaagggaccagtttagaaggaagggaaacaatgatgttatt
gctgacatggagaggcattgtaacttacagattgcagcacatatttcacagatttctacc
aatcaaaagaatgaagaacacgagcactatcatatggaaggagttgttgaaagcccaatg
attgatgatgatggggaatgcttttcacctattattttgaatgccacctcgataaacgtt
gaagtttactataataaagctgtcaattatacacttatggttacttttgtttcattttta
caagttctcttactgatccgtcaaatggagcatagcaacacacagtcgggggcagccaag
gtctccttgctcatgataggacaacaagcgatcatggatgcatacctttgccttttacat
ttgacagctgggattttagttgaatctctatttaatgcatttgcaacagcagcttttttc
aagtttgtggtattttctatttttgagatgagatatcttcttgcaatttggaaagcacga
agaccaatgaatactggtgaagtttgggagacaatgaggcgtgaactatctgttctttac
agtcatttctatggtgttcttttaggaggtatcattatcatgtatgaatttcacacattc
ttgcgctccattctgcttgttttgtactcattttggcttcctcaaataattacaaatatt
attcgtgatacgagaaagccactacatcctcattatattgtggggatgacactcactcga
ttggcagttccactttatgcctttgggtgcccaaggaatttcatgcgagttgacattgat
ataaagtggtgtatctgtttgacaatattcttaggctttcaagccttaattctcctcctt
cagcattacttgggagctcgttggttcattcctcgccagatcctaccagagaagtacagc
tacttccggagagctgaccgggacagtaatcatgtcgttgattgtgtgatatgtatggct
gctgttgatactgtgcagcgggcaagtgaatgcatgataactccttgtgaccatttcttc
catgctggatgcttgcaaagatggatggatataaaaatggaatgccctacatgtcgtcgg
ccattgcctccggtgtaa
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