Cryptomeria japonica (Japanese cedar): 131080003
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Entry
131080003 CDS
T10556
Name
(RefSeq) eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cjf03012
]
131080003
Translation factors [BR:
cjf03012
]
Eukaryotic type
Initiation factors
eIF-5
131080003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Roc
Motif
Other DBs
NCBI-GeneID:
131080003
NCBI-ProteinID:
XP_057874036
LinkDB
All DBs
Position
3:complement(356595469..356617034)
Genome browser
AA seq
1458 aa
AA seq
DB search
MGRKKAGVAAGDDAPAAQSGKSKKKNLIVDDDEYAIVDPVADNNADTALEDEVSASLKGI
SLNDSNNNNKSRNKNSKKGKKNDDNEDDDDGDGALLEKSDEDNVSHVSSIGGKKRGKKGK
QSKQDLDDFDEENLEAVDGLPNVNGHGGKKDKKKGGGAKVKGKPDMFSLLADMEEVEEVE
EDGDGGESAVVDNVGGDDVDDESVEVVFTGKKKAKGKKVSFQIEEIDSVLDATVDLDEPS
EWIFTGKKKAKGKKIEQQEHEFDETKESLPEEEETIISFSGKKKGKKGSQKKFEEDREPS
FVDVKEDDDNDDDGTIVFSGKKKAKGKKNTSFTTSMLNAGLLDEEDGEGDKSVDNFTLEE
KHEDSEVDDVIQFTGKKKGKKGKKTGKMVEGNANADPNDDAVMIDEGQKQEGPASVQEPL
PSSDSAVSKKQKQKKKKSGRTAEEEEDLDKILAELDLGTEKSKSAGADEVPKSEIIESEP
AKAEVLPDEVSAEPEGPGESAAAKKKKKKKEKEKEKKAAVAAAEEKGEAETKQEKSKEVK
GKILDKKVPKHVREMQERLARLKEEEERRKREEEEKRRKEEEEQSRLEELERQKEEAKRR
KKEREKEKLQRKKAEGKLLTGKQKEEARRLALMREQFLAQSGGLSDISKEEQIASAPKKP
KYETKKKKRGPTTADSAASQQAMLTEDHDIQDEAPQEAYDSKVKEEASAMIIEPVESEVH
MDVEQEKMKTEEEEEDDWDAKSWDEKDVALPVKSAFAEEEESSISNKTIKSSAGPAAKSV
VKNTTAASVPKSAPMSSVAKPAPPVKPSLPVKPVQQVQPESEEDSESEETESEDENMEDN
KRQAASRKREVRKAEAILKRNADDLRSPICCILGHVDTGKTKLLDCIRRTNVQEGEAGGI
TQQIGATYFPMENIRERTKELKADANFRVPGLLVIDTPGHESFTNLRARGSSLCDIAILV
VDIMHGLEPQTLESLNLLKMRHTPFVVALNKVDRLYGWKARPNAPIRMTFKQQSKDVQNE
FEHRLTQVITELKEQGLNSELYFRNKEVKKYVSIVPTSAISGEGVPDLLMLLVQLTQKMM
EERLMYISEIQCTVLEVKVIEGLGTTIDVILINGVLHEGDQIVVCGMQGPIVTTIRALLT
PHPMKELRVKGSYQHHKELKAAQGIKITAQGFEHAIAGTQLYVVGPDDDLDDVKEEAMQD
INNVMSRIDKSGEGVYVQASTLGSLEALLEFLKTPAVSIPVSAIGIGPVHKKDVMRASVM
LEKKKKEYAAILAFDVKITPEARELADEVGVKIFAADIIYHLFDQFKAYMDNLKEERKKE
AAEDAVFPCVLGILPNCVFNKKDPIIVGVDILEGIARIGTPLCVPTKDFIDIGKIASIEI
NHKAVDMAKKGEKVAMKIVGSNADEAQKMFGRHFEMEDEFVSHLTRGSIDILKENYRDDL
SNDDWKLVVKLKKLLKIP
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagaaggcaggcgtggccgcaggggatgatgcccctgccgctcagagcggt
aaaagtaaaaagaagaatctgatcgttgatgacgatgaatacgcgattgtcgatccagtg
gctgacaacaacgcagataccgctttggaggatgaagtttctgcttcgcttaaaggtata
tctctgaatgatagtaataataataacaaatctaggaataagaatagtaagaaagggaaa
aagaatgatgataatgaggatgatgatgacggggacggggctttgcttgaaaagagtgat
gaggataacgtgagtcatgtttcgtcgattggagggaagaagagggggaagaaggggaaa
caatctaagcaggatttggatgattttgacgaagagaatttggaggctgtggatgggctt
ccaaatgttaatggtcatggtgggaagaaggataaaaaaaaaggaggcggtgctaaggtg
aaggggaaaccagatatgttttccttattggcagacatggaggaggtggaggaggtggag
gaggatggggatggtggagagtctgctgttgtggataacgtggggggtgacgatgtggat
gatgaatcggttgaagtagtttttacggggaaaaagaaagccaagggcaagaaggtgtcg
tttcagatagaggaaatcgacagtgttctagatgcgactgtagatttggatgagccgagt
gaatggatttttacaggaaaaaagaaggccaagggtaagaaaattgaacagcaagagcat
gaatttgacgagactaaggagagccttccagaagaggaagagactattattagctttagt
ggtaaaaagaaggggaagaagggtagtcagaagaaatttgaggaggacagggagccttct
tttgttgatgtaaaggaggatgatgataatgatgatgatggtaccattgttttttctgga
aagaagaaggccaagggtaagaaaaatacttcgttcacaacttcaatgttgaatgctggg
cttttggatgaagaagatggggaaggagataaatcagtggacaattttacattggaggaa
aaacatgaggacagcgaagtagatgatgtgattcaatttacagggaaaaagaaggggaag
aaaggcaaaaagacagggaagatggtggaaggcaatgccaatgctgatccaaacgatgat
gcggtcatgattgatgagggtcaaaagcaagaagggcctgcaagtgttcaagagcctcta
ccttctagtgattcagctgtatccaagaaacaaaaacaaaagaagaagaaaagtggaaga
actgccgaggaggaggaggacctggataagattctggctgagctagatttaggtacagaa
aagtccaagtctgctggggcagatgaagtgcctaaatcagagatcattgaatctgaacca
gcaaaagcagaagtattaccagatgaagttagtgctgaacctgaagggcctggggaatca
gcagcagcaaagaaaaagaaaaaaaagaaggaaaaagagaaagagaagaaggcagcagtt
gcagccgctgaagagaagggcgaagcagagaccaaacaggaaaaatcgaaggaggttaaa
ggaaagattctagacaagaaggtcccaaaacatgtgagggaaatgcaggaaaggttggcg
aggttgaaagaagaggaggagagaaggaagcgcgaggaagaagagaagcgaagaaaagaa
gaggaagagcagagcagattagaagaattggaaaggcagaaagaagaggccaagcgcagg
aagaaagaacgagaaaaagagaaacttcagaggaagaaggcagagggtaaattactaact
gggaaacagaaggaagaagctcgcaggttggcattaatgagagagcagttccttgcccaa
agtgggggtttatctgatatctcaaaggaggagcaaattgcttcagcacccaagaagcca
aagtacgagacaaaaaagaaaaagcgtggtcctactactgctgattctgcagcttctcag
caggctatgctaacagaagaccatgacatccaagacgaagctccgcaagaggcatatgat
agtaaagtaaaggaagaggccagtgcaatgataattgagcctgttgagagtgaggttcac
atggatgttgagcaggagaaaatgaaaactgaagaggaagaggaagatgattgggatgct
aaaagttgggatgaaaaagatgtggctttaccagtaaaaagtgcttttgctgaagaggaa
gagagttccataagcaacaaaactattaagagttccgctgggcctgcagctaagtctgtc
gtaaaaaatacaactgctgcatctgtgcctaaatcggcacccatgtcgagtgtagcaaag
cctgcccctcctgttaaaccatctttgcctgtaaagccggttcaacaagtgcaacctgaa
agtgaagaagactctgaaagtgaagagactgagagtgaagatgaaaacatggaggataac
aagagacaggcagcatcaaggaagcgagaggtgaggaaagcagaagcaatattgaaaagg
aatgcagatgatttgcgctcgcctatttgttgcattcttggtcatgttgatacgggtaag
acaaagttgctcgattgtattcggcggacaaatgtgcaggaaggtgaggcaggagggatc
actcaacaaattggagccacatattttccaatggaaaacatacgggagaggacaaaagag
ttgaaggcagatgctaattttagggtacctggtttactagtaattgacactcctgggcat
gaatctttcacaaatttgagagctcgaggttctagcttatgtgatattgcgatattggtt
gttgatatcatgcatggcttggaaccacaaacgcttgagtcactaaatcttttgaaaatg
cgacatacaccctttgtagttgccctgaataaggtggataggctctatggttggaaggcc
cgtccaaatgctcctataagaatgacctttaagcaacagtcaaaagatgttcaaaatgag
tttgaacaccggctcactcaggttataacagagctcaaagagcaaggactgaattctgag
ctgtattttagaaataaagaagtgaagaaatatgttagtattgtgccaactagtgcgatc
agtggagaaggtgtgccagatctccttatgttacttgtgcagttaacacaaaaaatgatg
gaggaaaggcttatgtacatcagtgaaattcagtgtaccgtcttggaggtgaaggttata
gaaggtttgggaactacaattgatgttatattgataaatggtgtgcttcatgaaggcgat
cagattgtggtctgtggaatgcagggtcccattgtaacaactatccgtgctttattgact
ccacatccaatgaaggagcttcgagtgaagggatcttatcaacatcacaaggagttaaag
gcagcacagggaatcaagataactgctcagggttttgagcatgccatagcaggaacccag
ttatatgttgttggacctgatgatgatttagatgatgttaaggaagaagcaatgcaagat
ataaacaatgtaatgtctcggattgacaagagtggggaaggagtttatgttcaagcttca
actcttggatctttggaggctttacttgagttcttgaagaccccagctgtgagcatcccg
gttagtgcaattggtattgggcctgtgcataaaaaagatgtcatgcgtgcgagtgtaatg
cttgagaaaaagaagaaagagtacgctgcaattttggcatttgatgtcaaaattactccc
gaagctcgggagcttgcagatgaagttggtgtcaaaatatttgcagcggacattatttat
catctgtttgaccagtttaaagcatatatggacaatcttaaggaggaaaggaaaaaggag
gctgcagaagatgctgttttcccctgtgtcctgggcattttgccaaattgtgtttttaac
aagaaggatcctataattgttggtgttgatattcttgaaggcattgcaaggattggcacg
ccattatgtgttcccacaaaagatttcatagatattggcaaaatagcttcaattgagatc
aatcataaagctgttgacatggctaagaagggtgaaaaagttgccatgaagattgttggg
agtaatgctgatgaagcacagaaaatgtttggaaggcattttgaaatggaggatgaattt
gtgagtcatctcactagaggatccatagatatattgaaagaaaactacagggatgatttg
tccaatgatgattggaaacttgtggtgaaattgaaaaagctgttaaaaattccttaa
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