Cryptomeria japonica (Japanese cedar): 131080101
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Entry
131080101 CDS
T10556
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2 isoform X2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131080101
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131080101
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131080101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
DUF1180
Prok-RING_4
DUF6338
zf-ANAPC11
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
131080101
NCBI-ProteinID:
XP_057874179
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All DBs
Position
11:complement(561841025..561938581)
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AA seq
425 aa
AA seq
DB search
MHPIIAVGVLFTFLIITPTCSANVLLIGINLTMSFEDREANFASFVTQSGVCGTVQVTEP
FDACSPLVNKSIPGEDTSTQFALIKRGICSFDLKVRNAQAAGFHAAIIYNNEDGDHLIEM
GGISGGITIHAVFISKVSGQTLLKYSGNKNIECCIIPSREDTAWTVILIAFISLLALSAV
LAICVCLRSYRLRRRRRRPQRHIMSSREVKALPSLIFTSVVDDNCTSETCAVCLEDYTAG
DKLRVLPCCHKFHVICIDSWLTRWRTFCPVCKRDIKASIRQPPASEHTPLLSSSSLISSH
VSSFQGSPNEHIFSTSMPSYALSSFHSVSLNTPQSFSSIPFLEGNPINIRNVSRHSSLHS
LYSHQNSLHIPGSFISSYAPFSMPSVQNTSMQNTSSFSRTLYIPSSSDSSSSISPLTSYI
ALPDN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgattatagctgtgggagtgctgtttacattccttatcatcacccccacatgc
tctgcaaatgttcttctcatcgggatcaatttaactatgtctttcgaggacagggaagca
aatttcgcttcctttgtgacacagtcaggagtttgtggaactgttcaagtgacagaacct
tttgatgcatgctcgcctcttgtgaacaagtctattcctggagaagatacaagcactcaa
tttgcacttattaagagaggaatctgctcatttgacttaaaagtacgaaatgcacaggca
gctggttttcatgcagctattatctacaacaatgaggatggtgaccatctgattgaaatg
ggtgggatctctggaggtatcacaatacatgcagtatttatttcaaaagtatcgggtcaa
acgcttctaaagtatagtggaaacaaaaatattgaatgctgtataatcccttcaagagag
gatacagcatggacggtgatattaattgcttttatctcgctacttgccttatctgctgtg
cttgcaatttgtgtctgtttaaggagttaccggttacgccgtcgaaggcgtcgacctcag
cgtcatattatgagttctcgagaagtaaaagctttacccagccttatattcacttctgtt
gttgatgacaactgtacatcagagacgtgtgctgtgtgtcttgaggactacacagcagga
gataaacttcgggttctgccatgttgtcataaatttcatgtaatctgcatagactcttgg
ctcaccaggtggaggactttttgccctgtatgcaagcgtgatattaaggccagtattaga
cagcctccagcctcggaacacaccccacttctatcttcaagttccttaatttcttcccat
gtttcatcatttcagggatctccaaatgagcatatattttcgacttctatgccctcatat
gctttatcctcttttcacagtgtctcactaaatacaccacaatcatttagctccatccca
tttctggagggaaatcctatcaatattagaaatgtatccagacactcatctctccattcg
ctatattcacatcaaaattctttacatataccaggatcatttatttctagctatgcccct
ttttctatgcccagcgtacaaaatacatcaatgcaaaatactagttctttcagtcgaacc
ttgtatattccatcttccagtgactcctcctcaagtatctcccctcttacttcttatatt
gccttaccagacaactga
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