Cryptomeria japonica (Japanese cedar): 131856448
Help
Entry
131856448 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131856448
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131856448
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131856448
MMR (mismatch excision repair)
131856448
DSBR (double strand breaks repair)
HR (homologous recombination)
131856448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131856448
NCBI-ProteinID:
XP_059064229
LinkDB
All DBs
Position
7:84867739..84869490
Genome browser
AA seq
554 aa
AA seq
DB search
MATLTANAIADILAGMSLVDPSLQVTAIHSIQQPHSTNVKYRLQLSDGMHTHPTLLPDQM
NSLVLEEALVTGSILCLTEYSRKIFDKYTAIIILSFDIISNNAAIIGSPTPLLQAIAYLP
SNSSEDPLNPFPIIPIKTLTPYHKQWSIQGRALAKTPIHNFKNVGRDGKVFGFDFVDMLG
SEIHVTCFNELVDNFYHVIHSGSLYVISNGHIKVANTKYSSSTNPFEIILHDSSIVTPTT
CIDSTIPKHSFHIKSIDSLQSFPINALVDVIGIVLSISPTSTIRKRDGTETIKCTATIID
MSSCTIDITFWGRHCQIEGKQLFEMSLEPNPPVLLIKSGRIVSWNGKSLDTIFSTTLLIN
PDLLETTTLQTWYAKKGVDEPYISLSQTNLSPHTFENPIDISSITDESFPGQKNVCVKAT
ITKLHLDNFYYLSCPQVVNKKKCKKKVVQSSPNTFQCPKCSTDLSECDFSYMLKMDLQDE
TGELLKVTAFEGPLNTLLGVPAEDFQLLLAEPNAVEPILSNVIDCKFFFDLNIKMVPFAG
QETQSIVITAIKPT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattaactgcaaatgccatagcagacattcttgcaggcatgtctcttgttgac
ccttctttacaagttacagcaatacattccattcaacaacctcattctacaaatgtcaaa
tatcgcctacaactctctgatggtatgcacacccatccaacattgcttcctgaccaaatg
aacagtcttgttctagaagaagctttagtcacaggttctattctctgccttacagaatat
tctcgcaagatattcgacaaatacacggctattataattcttagcttcgacataatttca
aataatgcagctatcattggatctccaactccactcctacaagctattgcctaccttcca
tcaaatagttctgaagacccattaaaccctttcccaattattcccattaaaacattgacc
ccatatcacaaacaatggtccattcaaggtcgagcattagcaaaaacccctattcacaat
ttcaaaaatgtaggacgtgatgggaaagtttttggatttgattttgtagacatgttagga
tctgaaatacatgtgacttgttttaatgaacttgttgataacttttaccatgttattcac
tctggtagtctttatgtgatctccaacggtcatattaaagtggcaaacacaaaatatagt
agctccacaaacccttttgaaataatcctccacgactcttccatagtaactcctaccaca
tgcatagactctaccatacccaagcatagtttccacattaagagcatagattcactacaa
tcgttccctattaatgcccttgtagatgtcattggaatagttttatcaatctcccctaca
tcaaccatacgtaaaagagatggcactgagacaataaagtgtactgctacaatcatagac
atgtcaagttgtaccatagatattacattttggggtcgccactgtcaaatcgagggcaaa
caactatttgaaatgtccctagaaccgaatcctcctgttcttttgatcaagtctggccgt
atagtatcttggaatggaaaatcacttgatactatcttttcaactacacttttaatcaat
ccagatttattggaaaccacaacattacaaacatggtacgccaagaaaggggttgacgaa
ccctacatttcattgtcacaaaccaacctttccccccacacatttgaaaatccaatagat
atttcatctattactgatgaaagctttcctggccaaaagaatgtatgtgtgaaggccact
attacaaaacttcacttagacaacttttactacctatcttgtccacaggtagtgaacaaa
aaaaaatgtaagaaaaaagttgtgcaaagttcacccaacacattccaatgcccaaagtgt
tctactgatctctctgaatgcgattttagctacatgcttaaaatggacttgcaagatgaa
acaggtgagcttcttaaagttactgcattcgaaggaccattaaataccttgttgggtgtt
cctgcagaagatttccagctacttctagcagaacctaatgctgtggaacctatattgagc
aatgttattgattgcaaatttttctttgatctcaacatcaaaatggttccatttgctggc
caagaaacacaaagcattgttattacagccattaagcctacctaa
DBGET
integrated database retrieval system
