Cryptomeria japonica (Japanese cedar): 131856499
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Entry
131856499 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131856499
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131856499
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131856499
MMR (mismatch excision repair)
131856499
DSBR (double strand breaks repair)
HR (homologous recombination)
131856499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131856499
NCBI-ProteinID:
XP_059064278
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All DBs
Position
7:120151687..120158809
Genome browser
AA seq
472 aa
AA seq
DB search
MLGRDAPATTKRSLKFGIHLPPVQHESSVNISPIKALNPFQNKWTIKGRVTNKRKMHQYS
TPKSTGQVFSFDMIDSEGTEIRITCFGDVAEMHYHRVEPGTYYTVSKGCVKEANTKWNKL
NNHLEITLDNNSILKRCDDVVECEANNSQFTPINEITYCTNNTLVDVIGIVVAVGEPSLI
RRKDGSEVTKRIVKINDASAFTIDVNLWGETWQGLGEDLKSMHTTQAAVVLAVRNARVGY
FNGKVVNTTTATTLNINPSIPETETLMSRGKISDALLPQSCVAGQLNSQYSRMTITAVLE
RTSVLSETVETTIRAVVRIIKTDSFCYPACPLKFNGKECKKKCTQQSDNQWFCSRCQTAV
PECNYKYLLQMKLQDHTGALWATAFDEVGTNILQISAKELYMLQYDLTTQKMPQSIIKHV
LLSSFVFTLSITTDMYNSEPRLKATITKVARIDYQTENALLLAEIAQMTTTA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcgagacgcacctgccacaactaaacgatcccttaaatttggaattcacctc
ccacctgtgcagcacgaatcttctgttaatatcagcccgattaaagccttgaaccccttc
caaaataaatggacaataaaggggcgtgtgacaaacaagaggaagatgcatcaatacagt
acaccaaagtccactggccaagtatttagctttgacatgatagatagtgaaggtactgaa
attaggataacttgctttggcgatgtagcagaaatgcattatcatagggttgaaccagga
acatattatactgtgtcaaaaggttgcgttaaagaagctaacactaaatggaataagctt
aacaaccatcttgagataactttggacaacaattcaatattgaagcgttgtgatgatgtt
gttgaatgtgaagcaaataattctcaattcacaccaatcaatgaaattacatactgcacc
aacaacactttagttgatgttattggtattgtagttgctgttggagaaccctcattaatt
cgcaggaaggatggaagcgaagtaacaaagagaattgtaaaaataaatgatgcctcagct
tttactatcgatgttaacttatggggagaaacatggcaagggctaggtgaagatttgaag
agcatgcacacaacccaagcagctgttgtccttgcagtcagaaatgctcgtgttggttat
ttcaatggaaaggtggtcaacacaaccacagcaacaaccctaaatataaacccttctata
cctgaaacagagacacttatgtcaagaggaaagatttcagatgcccttctaccgcaatca
tgtgttgctggccagcttaactcacagtacagtagaatgacaatcacagctgttttagag
cgtacaagtgttctctctgaaacagttgaaactactattagggctgttgtgagaatcatt
aaaactgattctttttgctatccagcctgccctttgaaatttaatggaaaagaatgtaaa
aagaaatgcacccagcaaagtgataatcaatggttttgttcaagatgtcaaactgctgtg
ccagaatgcaattacaaatacttattgcagatgaagctccaagatcatacaggggctctt
tgggctactgcctttgacgaggttggcacaaatatactgcaaatatctgccaaggagctt
tacatgctgcagtacgatttgactacacaaaaaatgcctcagtccattatcaagcatgtc
cttttgtcttcctttgttttcacactctctattacaacagacatgtacaattcagaaccc
aggctcaaagcaacgataaccaaagttgccagaattgattaccagactgaaaatgctctt
ttgcttgcagagattgctcaaatgactacaactgcatag
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