Cryptomeria japonica (Japanese cedar): 131856671
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Entry
131856671 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131856671
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131856671
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131856671
MMR (mismatch excision repair)
131856671
DSBR (double strand breaks repair)
HR (homologous recombination)
131856671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131856671
NCBI-ProteinID:
XP_059064517
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All DBs
Position
7:complement(278606624..278610126)
Genome browser
AA seq
447 aa
AA seq
DB search
MKEIEDINSVIVKLLQESNKIKENLRKLIHQHEHKMAKQSRNPPPIPATLVSTIPSMELC
PLPIPTVEYIAAKNGHVFSFEIINTEGCEVRVTCFDEIAQLHSDRVEVGANYVISKGSIK
EANTRYNKLNMHLEIILSDASILKCCTHDDEPGQVHSPFIPIREVVQLTNNTLVDIIGVV
VHIGDIILIHGKDGSETNKQVVRINDLCGSTIDVNLWGPPSEQRGQDFKNMLTLECVLIL
VLCKGRVGYFNGKVVNMTSATTLNINPTFPEAEPLMLRGNISLHTQDLSAGFTHIDGKYT
RMTISSIHERMTVKPETIQTTLLVVLRFVNVTDKTFYYAACPLKVNGKPYAIGTIWETVF
DEVGTQLIKKTTKELCALQNDATMEQTHFYILNTLISHRYSFTMLVSTDTYNSEPKIKVT
INKICSVDYKTECDGLLAEIARLSTQA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatagaggacattaacagtgtcattgtgaagctgttgcaagagagcaacaag
ataaaggagaacctgagaaagctgattcatcagcatgaacataaaatggccaagcaatca
agaaaccctcctcctattcctgccacacttgtttccaccattcccagtatggaattatgc
cctcttcctataccaactgttgaatatatagctgctaagaatggccatgtttttagtttt
gaaattatcaacactgagggttgtgaagttagagttacatgttttgacgaaatagctcaa
ctacattctgatcgtgtggaggtaggtgctaactatgtcatttctaaagggtccattaag
gaggcaaacacaagatacaataaattgaacatgcatttagagatcatcctatctgatgct
tccatattaaaatgctgcacccatgatgatgaaccaggtcaagtccactcccctttcatc
cctattagggaagtggttcaactaactaataatacattagttgatatcattggtgttgtt
gtacatattggagatatcattctaatccatgggaaagatggcagtgaaacaaataagcaa
gttgttagaattaatgatctctgtggctcaacaattgatgtcaatctatggggtccacca
tcagaacaaagaggacaagatttcaaaaatatgttaacccttgaatgtgttcttatactt
gttttatgtaagggtcgtgtggggtattttaatgggaaggttgttaacatgacatctgca
acaacattaaatattaatcctactttcccagaggcagaacccctaatgttaagaggaaat
atttcattgcatactcaggatctctctgcaggatttactcacattgatggtaaatacact
aggatgactatttcatcaattcatgaacgtatgactgtcaaaccagaaacaattcaaacc
actttacttgttgttctgagatttgtgaacgtaacagataaaactttctattacgcagct
tgtccactgaaagtaaatggaaaaccttatgcaataggaactatttgggaaactgttttt
gatgaggttggaactcaattgataaagaaaactacaaaagagctttgcgcactgcaaaat
gatgccacaatggaacaaacacatttctatatccttaatacacttatttcacatcgttac
tcattcactatgctggtttctactgacacatacaactctgaacctaagataaaggttaca
atcaacaaaatatgctctgttgattataaaactgagtgtgatgggttacttgcagagatt
gctcgcctctctacacaggcttag
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