Cryptomeria japonica (Japanese cedar): 131858772
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Entry
131858772 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131858772
03420 Nucleotide excision repair
131858772
03430 Mismatch repair
131858772
03440 Homologous recombination
131858772
03460 Fanconi anemia pathway
131858772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131858772
03032 DNA replication proteins [BR:
cjf03032
]
131858772
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131858772
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131858772
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131858772
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131858772
MMR (mismatch excision repair)
131858772
DSBR (double strand breaks repair)
HR (homologous recombination)
131858772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
REPA_OB_2
tRNA_anti-codon
Rep-A_N
Motif
Other DBs
NCBI-GeneID:
131858772
NCBI-ProteinID:
XP_059068206
LinkDB
All DBs
Position
10:complement(64503305..64511574)
Genome browser
AA seq
353 aa
AA seq
DB search
MDVLTGNAIQLIYDGSVLVAPCLQIFAISNFGDGPEHGNRYRVDLSDGVHKQKASLPKKW
IVILDLEIICTTHAIVGEPMFLCVKQEDTVVQTMPPLCDASAEPSTSTKCQGSGRQRSLF
GGRVLAKDIYHYNTTKASGDVFSFDIVDREGTESRVTCFNELAKTHYDNIQVGVTYTLSG
GAIKPANKIYNKLISGLEINLVDDSMVTACNDDSSIPKHRYAFTTLDQVATINNNSTIDV
IGIVIRVDPTSTICKRDGTEVPRRTIKLVDMTRTTIDVTLWGAMVEKEGTELERRHYLQE
TTTLAIKNGRVCEFNGKYEIQASVDVKVYPLPSRYAFHLQCTSVTGSKLCVGL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctaaccggaaacgctatccagcttatctacgatgggtccgtccttgtggct
ccatgtctccaaatatttgctatatctaactttggggatggacctgagcatggcaatcgt
tatagagttgatctttcagatggcgttcacaaacaaaaggcatccttgccaaaaaagtgg
attgttattctggacttagagattatatgtacaacacatgctatagttggagaaccaatg
ttcctttgtgtaaaacaggaagacactgtagtacaaactatgcctcctctatgtgatgca
agtgccgagccaagcacatccacaaaatgtcagggttccgggcgacagagatcattgttt
gggggccgtgtcctagcgaaggacatctatcactataatacaacaaaagcaagtggtgat
gtttttagctttgacattgtagacagagaaggtactgaatcacgtgttacgtgtttcaat
gaacttgcaaaaacccattatgataacatccaagttggagtgacatacacattatctggg
ggagcaatcaagccagccaataaaatttacaacaaactcatcagtggactagaaataaac
ttggtagatgattcaatggttactgcctgcaatgatgactcttctatacccaagcacaga
tacgccttcacaactcttgatcaagtggctaccataaataacaactcaaccattgacgtt
attggaattgtcattcgtgttgatcccacctcaacaatatgcaaaagagatggtacagag
gttcctaggcgtaccattaagttagtcgacatgactcgaacaaccatcgatgttacacta
tggggcgcaatggtagaaaaggaaggtactgaacttgagcgaaggcattatttacaagaa
acaactactcttgctatcaagaatggtcgtgtatgtgaattcaatggaaagtatgagatt
caggcatctgtagatgtcaaggtatatcccttgccttctagatatgccttccatctgcag
tgtacatctgttactgggtccaagttgtgtgttggtctctaa
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