Cryptomeria japonica (Japanese cedar): 131859166
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Entry
131859166 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131859166
03420 Nucleotide excision repair
131859166
03430 Mismatch repair
131859166
03440 Homologous recombination
131859166
03460 Fanconi anemia pathway
131859166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131859166
03032 DNA replication proteins [BR:
cjf03032
]
131859166
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131859166
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131859166
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131859166
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131859166
MMR (mismatch excision repair)
131859166
DSBR (double strand breaks repair)
HR (homologous recombination)
131859166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
131859166
NCBI-ProteinID:
XP_059068710
LinkDB
All DBs
Position
10:732580670..732582323
Genome browser
AA seq
412 aa
AA seq
DB search
MASSATTSESTDHSTIDNLAKTQEYVPAPFVIQSINAGDDLPSALLQVLSFQKMQNNTDD
TNRHKLVLSDGTYMQLAILPSKYATLIDSDIVKMGTIVQLSSYTCRYIWNTRQEINYVYL
FKEQEPEMMYEDRPSTSKRSLQFATKLSSPQTTTSENISPIKTLNPYQNKWTIKGRVTHK
RPIKAYSTTTKNGHVFSFDIVDCEGSEIRITCFDEIAKLHSNCVDIDSHYLISTGSIKEE
NARYNKLNSHLKITLSDASILKRCTNEEQADQQGPPFTHINELFYLTNNTLVDIIGLALY
VGDIIPIHIKDGSQTHKRVVKISDLSNSTIDINLWGPTTVQNGLELKNMLTNDSVVILAL
RNARVGYFNGKLINITAASTLHINPTFPEAEHLTLKGKDPLLVVPFLQKLST
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcagcaaccacctctgaatcgacagaccactccaccattgataatttggca
aaaacccaagagtatgtccctgccccttttgtaattcaatctatcaatgctggggatgac
cttccttcagcattgctacaagttttgtcatttcagaaaatgcaaaacaacacagatgat
actaacagacataaattagtgttatctgatggcacatacatgcagttggcaatcttgcct
tctaaatatgctactttgatagattcagatattgtaaaaatgggcacgatagtccagtta
tcgagttatacatgccgatacatatggaacacaaggcaggaaatcaactatgtatacctg
ttcaaagaacaagaaccagaaatgatgtatgaggatagaccgtcaacatctaaacgatct
cttcagtttgccactaaattgtcatccccacaaacaacaacttctgaaaatataagtcct
atcaaaactttgaatccataccaaaataaatggacaatcaaagggagagttactcataaa
cggcctattaaggcatatagcacaaccacaaaaaatggccatgtctttagctttgatatt
gttgattgtgaaggttctgaaattagaattacatgttttgatgagatagctaagttacac
tctaactgtgtggacatagattcacattatcttatttcaacgggatctattaaggaggaa
aatgcaaggtacaacaaactaaacagtcatttaaaaatcaccttgtctgatgcatccata
ctaaaacgctgcaccaatgaagaacaagcagatcaacaaggtcctcctttcacgcacatt
aatgaattgttttatctaacaaataacacgttggttgacataattggccttgctctatat
gttggagatatcattccaatacacataaaagatggcagccaaacacacaaacgtgttgtg
aaaattagtgatctatctaattcaacaattgacatcaacctatggggtccaacgacagta
caaaatggcttagaattgaaaaatatgttgaccaatgatagtgtcgttatccttgcttta
cgtaatgctcgtgttggctatttcaatgggaagcttataaacataacagctgcaagcaca
ttacatatcaacccaacttttccagaagcagagcatctaacgttaaaaggaaaggaccct
ttgcttgttgtaccctttttgcagaaactatccacatag
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