Cryptomeria japonica (Japanese cedar): 131859291
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Entry
131859291 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131859291
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131859291
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131859291
MMR (mismatch excision repair)
131859291
DSBR (double strand breaks repair)
HR (homologous recombination)
131859291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131859291
NCBI-ProteinID:
XP_059068865
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Position
10:802766428..802848651
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AA seq
474 aa
AA seq
DB search
MTRYLIGRTPFVIERFLVTRVLRQFGRQQGIPQGACLYARRQQDRQISQLITERDTKIER
RGRAEEALATVQRAATGGPMRDTLRELTRRVQEADYYRQHYEAAVPRDRRNKWTINGRVT
HKRPIKAYSTAIKNGHVFSFDIVDYEGCEIRVTCFDEIAQLHSNRVDVGSHYIISKGSIK
EANVRYNKLNSYLEIILSDASILKRCSNEEQSDQQRPLFTPISELFHLTNNTLVDIIGLI
LYVGDIISIHRKDGSQTQKRVVKINDLSGSTIDINLWGPMAEQKGLELKNMLTNYSVVIL
ALRNAHVGYFNGKLINITATTILHINPTFPEAEPLTLRGKEPLLVVPFVAETIHIDGKYT
RMTISSIRERMSIKPETIQTTLLVVLRFVNVTDQNLCYTTCPLIVNGRPCKNKCTQQVDD
SWFCPRCEMTMQDCNYSYLLPVKLQDATGILWATTFDEGGIHLLHKTAKELCAL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggtatctgattgggaggacgccatttgttatagagcggtttctggttacccga
gttttgcgacagttcgggagacagcaggggattccgcagggagcgtgcttgtatgcacgg
cggcagcaggatcggcagatttctcagttgattactgagagagatacgaagatagagcgg
cgtggtcgagcagaggaggccttagcgaccgtgcagagagcagcgacgggtggtcctatg
agagacactcttagagagctgacacggagagtgcaggaggctgattattatagacagcat
tatgaggctgcagtgcccagagaccgacgtaataaatggacaatcaatgggagagttact
cataaacgccctattaaggcatatagcacagccataaaaaatggccatgtgtttagtttt
gacattgttgactatgagggctgtgaaattagagtcacatgttttgatgaaatagctcag
ttacactctaaccgtgtggacgtaggttcacattatattatttcaaagggatccattaag
gaggcaaatgtgaggtacaacaaactaaatagttatttagaaatcatcttgtctgatgca
tccatactaaaacgttgcagcaacgaagaacaatcagatcaacaacgtcctcttttcaca
cccattagtgaattgtttcatctaacaaataacacattggttgacataattggccttatt
ttatacgttggagatatcatatcaatacacaggaaagatggcagtcaaacacaaaaacgt
gttgtgaaaattaatgatctatctggttcaacaattgacatcaacctatggggtccaatg
gcagaacaaaaaggcctagaattgaaaaatatgttaaccaattatagtgtggttatcctt
gctttgcgtaatgctcatgttggctatttcaatgggaagcttataaacataacagctaca
accatattacatatcaacccaacttttccagaagcagaacctctaacattaagaggaaag
gagcctttgcttgttgtaccctttgttgcagaaactatccacatagatgggaaatatact
agaatgactatttcttcaatccgtgagaggatgagtatcaaaccagaaacaattcaaact
actttgctagttgttctgcgttttgtaaacgtaactgaccaaaatttatgttacacaact
tgtccactaatagtcaatggaaggccttgcaaaaacaaatgtacacaacaagttgatgat
tcttggttctgccctagatgtgaaatgactatgcaagattgtaattatagttacctcttg
ccagtaaagttacaagatgccacaggtattctatgggccactacatttgatgagggtggc
attcacttgctacacaaaactgcaaaagagctttgtgcactataa
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