Cryptomeria japonica (Japanese cedar): 131859549
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Entry
131859549 CDS
T10556
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131859549
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131859549
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
ZFYVE21_C
Motif
Other DBs
NCBI-GeneID:
131859549
NCBI-ProteinID:
XP_059069438
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Position
10:206548863..206551380
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AA seq
399 aa
AA seq
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MENTTMYLVMAVFIFGYTVAGSAMHDHGHAAGDKFLKNESDSFVGSLRARNGPMPWVGTT
GRLCKRSDGTKCQFSSCGLGRLLPKCAIGFARGVKGGRKGLSYTVTRSDDNPTNPALGTL
RYAVSLYSASPRGVWITFSHDMKIQLKQMLHVYNRTTIDGRGVRVTITGYSIELNKVQDV
ILHNLQVSDINSDTVHIFESKRVWVDHLTSFNGQRGLVSAVQGSTDITISNCRLSNNHYN
MLLGKDDSDTIDKQMRVTVYRNWFKDTDQRNPHCRWGYCHVVNNLYENWGSYAIGARVHA
QIYSEKNVFVPGKDSEVTEWYPGYELKWDTTPKIQSNGDLLLYGATFHQFLYNGPVVAPP
YKNHRQYPPVISTGKLPRLLGYCSGVLLKESVRSCLLRG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacaaccatgtacttggtgatggctgtctttatctttggatatactgttgct
ggttcagcaatgcatgaccatggtcatgcagctggtgacaaatttctgaagaatgaaagt
gattcttttgtgggatcattgcgagcgagaaatggtccaatgccttgggtaggaactaca
gggcgactgtgcaaaagatctgacggtaccaaatgccagttctccagctgcgggttaggg
cgtcttcttccaaaatgtgccattggattcgcaaggggtgtcaaaggcgggcgaaaagga
ctgtcttatacagtcaccagatctgatgataaccccacaaatcctgctcttggtacattg
cgttatgctgtgagcctctactctgccagccctagaggagtgtggatcaccttctcccat
gacatgaaaattcagctaaaacaaatgctgcatgtctataatcgaacaaccatagatggc
aggggagtgagggtaaccatcactggatattcaattgagctgaacaaagtccaagatgtt
attcttcataaccttcaagtcagtgacatcaactctgatacagttcacatatttgaatcc
aaaagggtctgggttgatcatttaacttcctttaatggccaaagaggtttggtatctgct
gttcagggttctactgatattactatttcaaattgtcgtctgtcaaataatcactacaat
atgttattgggtaaagatgattcagacacaattgacaaacaaatgcgagtcactgtgtat
agaaactggttcaaagatacagaccaacgcaatcctcactgcaggtggggatactgtcat
gttgtgaacaatctatatgaaaactggggatcatatgcaattggggcaagagttcatgca
cagatatactcagagaagaatgtatttgtacctggaaaagactctgaagtaactgaatgg
tacccggggtatgaacttaagtgggacaccactcctaagatccagtccaatggtgaccta
cttctatatggggctacatttcatcaattcctctacaatgggcctgtggttgctcctcct
tacaaaaaccacaggcagtatcctcctgtcattagcacaggaaaactaccacgtcttctt
ggttactgctctggtgttcttctcaaagaaagtgtccgttcttgccttctgcgtggataa
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