KEGG   Cryptomeria japonica (Japanese cedar): 131874201
Entry
131874201         CDS       T10556                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
  KO
K07466  replication factor A1
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030  DNA replication
cjf03420  Nucleotide excision repair
cjf03430  Mismatch repair
cjf03440  Homologous recombination
cjf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131874201
   03420 Nucleotide excision repair
    131874201
   03430 Mismatch repair
    131874201
   03440 Homologous recombination
    131874201
   03460 Fanconi anemia pathway
    131874201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cjf03000]
    131874201
   03032 DNA replication proteins [BR:cjf03032]
    131874201
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131874201
Transcription factors [BR:cjf03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    131874201
DNA replication proteins [BR:cjf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    131874201
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     131874201
   MMR (mismatch excision repair)
     131874201
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     131874201
SSDB
Motif
Pfam: Rep-A_N tRNA_anti-codon REPA_OB_2 DUF936 DUF223
Other DBs
NCBI-GeneID: 131874201
NCBI-ProteinID: XP_059073447
LinkDB
Position
3:complement(379616185..379617262)
AA seq 320 aa
MTSLTIDAIKLIVEGAIDLSPCIQIFFISTFGRNPKQTTLFRLEISDGTHKHKATLPKKY
DDYIISEEIKIGSIIKLSEYNYPKSSKTWWITIIRLEIVSTIHEMIGESVSLDADQYCQM
DQAAQLAPTSNIGVENLQNSGTLSQTKVLFGVKRPQSSSGVLSIITPIKNLNPFQTRWTI
KVRVTMKKEIHQYNKQTGNGRVFSFNIIDNEGTKARVSSFNNMADAHYGNIDIGATYKIS
GGVVKSANKIYNKLNSGIKITLVLESIVTPCEDDPSIPKNHFSFMPINEILEQRNNSVID
VIGVVICVEPSSTIKRRDGT
NT seq 963 nt   +upstreamnt  +downstreamnt
atgacctcattaactatagatgcaatcaagcttatagtggaaggagctatagacttatcc
ccatgcatccaaatattctttatatcaacatttgggagaaaccctaaacaaactacgcta
ttccgattagaaatttctgatggtacacacaagcacaaagcaacattgcccaagaagtat
gatgattacataatctctgaagaaattaagatcggatccataataaagttatcagagtac
aattatcccaaatcgagtaaaacatggtggattacgattatacgcctagagatcgtatct
acgatacatgaaatgattggggaatcagtctcccttgatgcagaccagtactgccagatg
gatcaagcagcacaactcgcccctacttcgaatattggagtagaaaacctccaaaattcg
gggacactctctcagacaaaagtactatttggagtaaagcgaccccaaagttcaagtggt
gtattgagcataattacacctataaagaacttgaatccattccaaacaaggtggactatc
aaagttcgtgttactatgaagaaagaaattcatcaatacaataagcaaacaggaaatggt
cgagtgtttagcttcaacatcatagacaatgaagggacaaaggcacgtgtatcaagtttt
aacaatatggcagatgcacattatggtaatatagacattggagctacgtataagatttca
ggtggggttgtgaaatctgctaataaaatttataacaagcttaacagtggaataaaaata
actcttgtgcttgaatcaatagtaaccccttgtgaagatgacccttccattccaaaaaac
catttctcattcatgcctattaatgaaatacttgagcaaagaaataattcagtcattgat
gttattggtgttgttatctgtgtagaaccaagctcaacaatcaaaagaagagatggaaca
tag

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