Cryptomeria japonica (Japanese cedar): 131874363
Help
Entry
131874363 CDS
T10556
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131874363
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131874363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
gag_pre-integrs
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131874363
NCBI-ProteinID:
XP_059073683
LinkDB
All DBs
Position
3:complement(759726361..759731720)
Genome browser
AA seq
463 aa
AA seq
DB search
MVRGAMVIERGSRLGTLYQLDACTVECNSTSDKIVKKTTQLEKERVSLSTDGHGFWVPKG
ALSTESKLPAEKTMLWHLRLGHIEEEEVPEAEPEAELEPDLARRSLNNSKRKLSSCEMGN
PIDDCWHCDPNWVNNRKRLADYAIGFGKNAIGGKTGIFYIVTDPNDDDLVNPRPGTLRHA
VIQTEPLWIIFQRDMVIQLKEELIMNSYKTIDGRGAIVHIANGACITIQYVTNIIIHGVH
IHDCNPAGNTNVRSSPTHYGFRTKSDGDGISIFGSSAIWVDQCSLSSCAIGLIDAIMGST
AITISNSFFTHHDKLMLLGHNDAYTEDVKMQVTVAFNHFGEGLVQRMPTCRNGYFHVVNN
DYTHWEMYAIGGSANPTINSQGNRFLAPDYRFHKEVTKHQDSTEGNWRSVGDLMLNGAFF
TASGAKESSSYAKASSMAARPSSIVGSITASSDVLTCRKGSSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaggtgctatggtgatagaaagaggaagcagattgggtacattgtaccagctt
gatgcatgtacagttgagtgcaatagtacttctgataagattgtgaaaaagacaactcag
ttggaaaaggagagggtttctctttcaacagatggccatggtttttgggtacccaagggt
gctctgtctaccgaatcaaagttgcctgcagagaagaccatgttatggcacctgagactc
ggccacatagaggaagaagaggtacctgaagctgaacctgaagctgaacttgaaccagat
cttgctcgaaggagtttaaataattcgaaaagaaagttgagctcgtgtgaaatggggaac
cccatcgatgattgttggcattgtgatcctaactgggttaacaaccgaaagagactagct
gattatgccatcggatttggcaaaaacgccattggaggtaagactggcatattttatata
gttacagatccaaatgatgatgacctggttaatcctcgacctggcactctgcggcatgct
gttattcaaaccgaacctctttggattattttccaaagagatatggttattcaactcaag
gaggagcttatcatgaatagttataagactattgatggtagaggtgccattgttcatata
gcaaatggagcttgcattacaattcagtatgtgaccaatattatcattcatggagttcat
atccatgactgtaaccctgcgggaaatacaaatgttaggagctccccgacacattatggg
tttagaaccaagagtgatggggatgggatttccatctttggatcaagcgcaatttgggtt
gaccaatgttcattgtcaagttgcgcaattggattgatcgacgccatcatgggttccact
gctataaccatttcaaatagctttttcactcaccatgacaagctgatgctcctaggacac
aatgacgcctacaccgaggatgtcaaaatgcaagtaacagttgctttcaaccactttgga
gaagggcttgttcaacgtatgcccacatgtcgaaatggatactttcatgtggtgaacaat
gattacacccactgggaaatgtatgcaatcgggggaagtgcaaaccccaccattaacagc
caaggcaacagattccttgctcctgattatcgattccacaaggaggttacaaagcaccaa
gattcaacagaaggcaactggagatcagtgggagatcttatgttaaatggggcattcttc
acagcatcaggggctaaagaatcctcaagctatgccaaagcttcgagtatggcggcaaga
ccttcctctattgtgggctctatcactgcaagttcggatgttctcacctgcagaaaaggt
tccagcagttag
DBGET
integrated database retrieval system
