Cryptomeria japonica (Japanese cedar): 131874862
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Entry
131874862 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131874862
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131874862
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131874862
MMR (mismatch excision repair)
131874862
DSBR (double strand breaks repair)
HR (homologous recombination)
131874862
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131874862
NCBI-ProteinID:
XP_059074773
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Position
4:29763719..29765140
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AA seq
473 aa
AA seq
DB search
MSKDRPSTSKRSLQFATELPSPQTMTSENIRPIKNLNPYQNKWTIKGRVTHKCPIKVYSR
TTKNGHVFSFDIVDYEGCEVRVTCFDEIAQLHSNRVDVGSHYIISKGSIKEANARYNKLK
SHLEIILFDASILKRCTNEEQADQQHPLFMPISELFHLTNNTLVDIIRLVLYIGDIIPIH
RKDGSQTQKRVVKINDLSSSTFDINLWGPMAEQKGLELKNMLTNDSVVILALRNPRVGYF
NGKLINITAATTLHINPPFTEEEPLTLRGKDPFLVIPLVQETIHIDEKYTGMTISSIHER
MSVKPETIQTTLLVVLHFVNLTDQSFCYGACPLIVNGRHCKKKCTQQLDDSWFCPRCEMT
MQDCNYSYLLPVKLQDATSTLWATAFDEDVIHLLHKTAKELCALQNDATTTETPCSVIKR
LLSHHYSFTLLVCIDTYNSESKMKVTVNKVSPVDFKAECDTLLAEIGRLSTQA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggatagaccatcaacatctaaacgatctcttcagtttgctactgaattgcca
tccccgcaaacaatgacttctgaaaatataaggcctatcaaaaatttgaatccataccag
aataaatggacaatcaaaggcagagttactcataaatgccctattaaggtatatagcaga
accacaaaaaatggccatgtgtttagctttgacattgttgactatgaggggtgtgaagtt
agagtcacatgttttgatgaaatagctcagttacactctaaccgtgtggacgtaggttca
cattatattatttcaaagggatccattaaggaagcaaatgcgaggtacaacaaactaaaa
agtcatttagaaatcatcttgtttgatgcatccatactgaaacgctgcaccaacgaagaa
caagcagatcaacaacatcctcttttcatgcccattagtgaattgtttcatctaacaaat
aacacattggttgacataattcgccttgttttatacattggagatatcattccaatacac
aggaaagatggcagtcaaacacaaaagcgtgttgtgaaaattaatgatctatctagttca
acttttgacatcaacctatggggtccaatggcagaacaaaaaggcctcgaattgaaaaat
atgttaaccaatgatagtgtggttatccttgctttgcgtaatcctcgtgttggctatttt
aatgggaagcttataaatataacagctgcgaccacattacatatcaacccaccttttaca
gaagaagaacctctaacattaagaggaaaggacccttttcttgttatacccttggttcaa
gaaactatccacatagatgagaaatatactggaatgactatttcttcaatccatgagagg
atgagtgtcaaaccagaaacaattcagactactttgctagttgttctgcattttgtaaac
ttaactgatcaaagtttctgttacggagcttgtccactgatagtcaatggaaggcattgc
aaaaagaaatgtacacaacaacttgatgattcttggttctgccctagatgtgaaatgact
atgcaagattgtaattatagttacctcttgccagtaaagttacaagatgccacaagtact
ctttgggccactgcatttgatgaggatgtcattcatttgctacacaaaactgcaaaagag
ctttgtgcactacaaaatgatgcaacaacaacagaaacaccttgttcagtgattaaaaga
ctactgtcacatcactattcattcacactactggtatgcattgacacatacaattcagaa
tcaaagatgaaagtcacagtcaataaagtctctcctgttgacttcaaagctgagtgtgat
acactacttgcagaaattggtcgcctaagtacacaggcttag
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