Cryptomeria japonica (Japanese cedar): 131875184
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Entry
131875184 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131875184
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131875184
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131875184
MMR (mismatch excision repair)
131875184
DSBR (double strand breaks repair)
HR (homologous recombination)
131875184
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131875184
NCBI-ProteinID:
XP_059075209
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Position
4:501099985..501101391
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AA seq
468 aa
AA seq
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MISEDKSSTSKRSLQFATELPSSQTTTSENISPIKTLNPYQNKWMIKGRVTHKRPIKAYS
TATKNGHVFSFDIVDYEGSEIRITCFDEIAKLHSNRVDIGSHYLISKGSIKEVNARYNKL
NNHLEITLSDASILKRCTNEEQEDQQGPPFMPINELFHLTNNTLVDIIGLVLYVGDIIPI
HKKDGSQTHKHVVKISDLSDSTIDINLWGPMAEQKGLELKNMLSNDSVVILALRNARVGY
FNGKLINITAATTLHINPTFPKVDLLTLRGKDPLLVVPFVAETIHIDGKYSRMTISSIRE
WMSIKPETIQRTLLAVLRFVNITDQNFYYAACPLIVNGRPCKKKCTQQVDDSWFCSRCQM
TMQDCNYSYLLPLKLQDATGTLWAIAFDEGSIHLLHKTAKQLCALQNDVTTIETTSSVIK
RLLSCHYSFTLLVSIEAYNSETKIKVTVNKVAHVDFKAECHALLAEIG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatatctgaggataaatcatcaacatctaaacgatctcttcaatttgccactgaattg
ccatcctcgcaaacaacaacttctgaaaatataagccctataaaaactttgaatccatac
caaaataaatggatgatcaaagggagagttactcataaacgacctattaaggcatatagc
acagccacaaaaaatggccatgtgtttagctttgacattgttgattatgaaggttctgaa
attagaattacatgttttgatgagatagctaagttacactctaaccgtgtggacataggt
tcacattatcttatttcaaagggatctattaaggaggtaaatgcaaggtacaataaacta
aacaatcatttagaaataaccttgtctgatgcatccatactaaaacgctgcaccaatgaa
gaacaagaagatcaacaaggtcctcctttcatgcccattaatgaattgtttcatctaaca
aataacacgctggttgacattattggccttgttctatatgttggagatatcattccaata
cacaagaaagatggcagtcaaacacacaaacatgttgtgaaaattagtgatctatctgat
tcaacaattgacatcaacctatggggtccaatggcagaacaaaaaggcctggaattgaaa
aatatgttgagcaatgatagtgtggttatccttgctttacgtaatgctcgtgttggctat
ttcaatgggaagcttataaacataacagctgcaaccacattacatatcaacccaactttt
ccaaaagtagaccttctaacgttaagaggaaaggaccctttgcttgttgtaccctttgtt
gcagaaactatccacatagatggtaaatatagtagaatgactatttcttcaatccgtgag
tggatgagcatcaaaccagaaacaattcagagaactttgctagccgttctgcgctttgta
aacataactgaccaaaatttctattacgcagcctgtccactaatagtcaatggaaggcct
tgcaagaaaaaatgtacacagcaagttgatgattcttggttttgctctagatgtcaaatg
actatgcaagactgtaattatagttacctcttgccactgaagttacaagatgccacaggt
actctatgggccattgcatttgatgagggtagcattcacttgctacacaaaactgcaaaa
caactttgtgcactacaaaatgatgtaacaacaatagagacaacttcctcagtgattaag
agactactgtcatgtcactattcattcacactactggtttccattgaggcatataattca
gaaacaaagataaaagtgacagtcaataaagttgctcatgttgacttcaaagctgagtgt
catgcactacttgcagaaattggctga
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