Cryptomeria japonica (Japanese cedar): 131876646
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Entry
131876646 CDS
T10556
Name
(RefSeq) endoribonuclease Dicer homolog 3-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131876646
microRNA pathway
RISC loading complex
131876646
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GFIT
Other DBs
NCBI-GeneID:
131876646
NCBI-ProteinID:
XP_059078072
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Position
6:complement(446897787..446912795)
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AA seq
1003 aa
AA seq
DB search
MELHSTAKIDALSDSWDEDETGVTLNVYELRFTSRSNNDKTYSNFAFLMKSELDDDITNT
EIDLFVTTDKIVNSEFLPRGQMTLDLTQMKNAKDFQEIIFNGIFGNLRNKKKFTEKKNLW
CSSYMYLILPLESDKSGVSVIDWKCIETCASRAREFKSLSTISEEDYSTIDIDNIKEAPM
GGTIHLHSQGESQILILASGICESSNLISKAVLTVHNGMLYQVVEIIHEKTAESPFPLKK
DTQQRYDNYSQYFEKRHGKKLEYSNQPLLRVKHAKQPRNFLTKHQVQPVENEGTFVELPP
ELCLNLDVSSSVMKSLCLVPSVMRRLISLMLASQLNKTIREERPECPPVSLQLIMEAITS
HKCLECYSYERLELLGDSFLKYATSLHLFMKYENGDEGELSSRRAVAVCNKTLHGLALHR
NLQGYIIDEQFDVRKWVAPGLFCRSIVPCSCNLEDPNSLQTGKVCDKGHRWIHSKTISDV
LEALIGAHLIGGGTKAALEFMRWMNIEVDIEDKSIDIACNRSFDYPSALETNLDELQSLL
DYQFKNKHLLVEALTHASANGGCSYQRSEFLGDSVLDLLITQHLYSTYQESSQGTLSDLR
QVAVNNEKFGRATVNHNIHNYIRHNSDDLQNQIANFVQKFKQRRGDDCPFGGGMHAPKVL
GDILESISGAILVDTQLELDIVWEKIKPILSPSTGKNKTIELQPVRELRELCDQQHYNYS
SDITKKENVSVATVQIQIEICGEGSDTNKKSAQIKAAKHALAQLKAMGIYHDRHTHVQSS
MDATGNEAPHGSNLIAQEKMIIARSPHGDIESDRPKKRTKARKISVNSLIPEDHIGDGKD
VPITHNSGGGLIITNEDVERNHPKKRAKKECSLPVHILLSSQQGSYRCNLYQLCQKMHCM
EPQFTLVEESDMPHKARFVFKVERAASFIHTQRSVGAVFFLIWWSHYGVWDPPRCGVPMH
GERLSHVGWGPSTTWGGHPCLLYALQAAILLCTPSKLAVLPTN
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggagttacattcgactgctaaaatagatgctttatctgatagttgggatgaagacgag
acaggagtaactttgaatgtttatgaacttcggtttacatctcgatccaataatgataag
acatattcaaattttgcctttttgatgaaatctgaattggatgatgacattacaaacaca
gaaatagatttgtttgtaactacagataagattgttaattcagaatttttgccaagagga
caaatgactttggatttaactcagatgaagaatgcgaaagattttcaagaaataattttc
aatggaatttttggaaatctaaggaataagaaaaaattcactgaaaagaaaaatctatgg
tgcagttcctatatgtacttaattttgcccttagaatcagataagtctggtgtaagtgtt
attgactggaaatgcattgaaacatgtgcatcaagagctagagaatttaaatcactttca
actatttcagaagaggactatagtaccattgatattgataatataaaagaggctcctatg
ggaggaacaatacatttgcatagccaaggggaatcacaaattttgattctggcaagtggc
atttgtgaatcttcaaatttgataagtaaagcggtacttactgttcataatggaatgctt
taccaagtggtggaaattatccatgaaaaaactgctgagagtcctttccctttgaaaaaa
gatactcaacaacgttatgataactacagtcaatattttgagaaaaggcatggaaagaaa
cttgagtattcaaatcaaccacttcttagggtgaagcatgctaagcaacctcgtaatttt
cttacgaaacaccaagtacagccagttgagaatgaaggaacatttgtggagcttcctcca
gagttgtgtttgaatttggatgtttcaagctctgttatgaagtcattgtgtttggttcca
tctgtgatgcgtcgcctcatttcgttaatgcttgcaagccaactcaataaaacaatcaga
gaagaacgcccagaatgtccccctgtgtccttacaactgataatggaagcaatcacatcg
cataaatgtttagagtgttactcatacgagaggttggaattattgggtgactcatttttg
aaatatgccaccagtctgcatctttttatgaaatatgaaaatggagatgaaggagagtta
tcatctcgtagagctgtggcagtttgtaacaaaactcttcatggtttggcactgcatcgt
aatttacaggggtatattatagatgagcaatttgatgtgcgcaaatgggtggctcctgga
ttattttgtagaagtattgttccctgctcttgcaacttagaagatcctaacagccttcaa
acaggaaaagtttgtgataagggacatcgatggattcattcaaaaacaatatcagatgtt
ttggaggcattaattggagcacatttaattggagggggtacaaaggcagcccttgagttc
atgaggtggatgaacatagaggttgacattgaagacaaatcaatagatattgcatgcaat
cgctcttttgattatcctagtgctttggaaacaaatttggatgaattgcaatccctccta
gattaccaatttaagaacaaacatctcttagtggaagcactcacacatgcttcagcaaat
ggaggatgttcctaccagcggtcagaattccttggcgactctgtgctggatctgcttatt
actcagcatctgtattcaacataccaagaatcatcccagggaacattatcagatttacgg
caggtagctgttaataatgagaagtttggtcgagcaacagtcaaccataatattcacaac
tatattcgtcacaattcagatgacctacaaaatcaaatagcaaattttgttcaaaaattt
aaacaacgtagaggtgatgattgcccgtttggaggaggaatgcatgctcccaaggtgcta
ggagatatattagaaagcatttccggtgcaatattagtggatactcaacttgaactagat
attgtgtgggaaaaaataaaacccattttgtctcctagtacgggaaaaaataaaaccatt
gaattgcaaccagtacgggaattgcgtgagctctgtgatcagcaacattataattacagc
tcggacatcactaagaaagagaatgttagtgtggccactgtacaaatacagatcgagata
tgtggagaaggttcagacacgaataagaagtctgcacaaattaaagctgccaaacatgcg
ttggcacagttaaaggcaatgggaatatatcatgaccgtcatacccatgtccaaagttca
atggatgcgactgggaacgaagctccacatggatccaatctcattgctcaagaaaaaatg
ataattgctaggagtccacatggggatatagaaagtgatcggccaaagaagaggaccaaa
gctagaaagatatcagtgaattccttaatacctgaagatcatattggtgatggaaaggac
gttcctataacgcacaattccggaggtggtctcataattacaaatgaggatgtagaacgc
aatcatccaaagaagagagcgaagaaagagtgttccctcccagtacacattttgctcagt
tcgcaacaaggtagttatagatgcaatttgtatcaattgtgtcaaaagatgcattgcatg
gaacctcaatttacactggtagaagaatcggacatgcctcacaaagcaaggtttgtattc
aaagttgagcgggctgcaagttttattcatacccagagaagcgttggagctgtgtttttt
ttaatttggtggagtcactatggtgtttgggacccaccacggtgtggggttcccatgcat
ggtgagaggctctcccacgtgggatgggggccatccactacgtggggtggtcacccatgc
cttctatatgctctgcaagccgccattctgctttgcactcctagcaaattggctgtgctt
ccaaccaattag
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