KEGG   Cryptomeria japonica (Japanese cedar): 6166593
Entry
6166593           CDS       T10556                                 
Symbol
psbB, CrjaCp005
Name
(RefSeq) photosystem II 47 kDa protein
  KO
K02704  photosystem II CP47 chlorophyll apoprotein
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf00195  Photosynthesis
cjf01100  Metabolic pathways
Module
cjf_M00161  Photosystem II
cjf_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09100 Metabolism
  09102 Energy metabolism
   00195 Photosynthesis
    6166593 (psbB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:cjf00194]
    6166593 (psbB)
Photosynthesis proteins [BR:cjf00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    6166593 (psbB)
SSDB
Motif
Pfam: PSII
Other DBs
NCBI-GeneID: 6166593
NCBI-ProteinID: YP_001806634
UniProt: B1VKC1 C4XUP5
LinkDB
Position
Pltd:4013..5539
AA seq 508 aa
MGLPWYRVHTVVLNDPGRLIAVHIMHTALVSGWAGSMALYELAVFDPSDPILDPMWRQGM
FVIPFMTRLGIKDSWGGWSITGETGSNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
DVFCDSRTGKPSLDLPKIFGIHLFLSGAACFGFGAFHVTGLYGPGIWVSDPYGLTGKIQP
VNPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
SIAAVFFAAFIVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIDRRVRAGLAENLSLSE
AWSKIPEKLAFYDYIGNNPAKGGLFRAGAMDNGDGIAVGWLGHPIFKDKNGHELFVRRMP
TFFETFPVVLVDEEGIVKADVPFRRAESKYSVEQVGVTVEFYGGELDGVSFGDPAIVKKY
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDVFA
GIDPDLDAQVEFGAFQKLGDPTTKRQVV
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgggtttgccttggtatcgtgtccataccgtcgtgttgaatgatcctggccggttaatc
gctgtgcatataatgcatacagctctagtttctggatgggccggttcgatggctctttac
gaattagcagttttcgatccatccgatcctattcttgatccaatgtggagacaaggtatg
ttcgttataccttttatgactcgtttaggaataaaggattcatggggtggatggagtata
accggagaaaccggatctaatccaggtatttggagttatgaaggtgtggccggggcacat
attgtgttttctggcttgtgctttttagcagctatctggcattgggtatattgggatcta
gacgtattctgtgattcccgtacaggaaaaccttctttagatttgcctaagatttttgga
attcatttattcctctcaggagcagcttgtttcggattcggagcgtttcatgtaacgggt
ttgtatggccctggaatatgggtgtctgatccttatggactaactggaaaaatacagcct
gtaaatccggcatggggagctgaaggttttgatccttttgttccgggaggaatagcttct
catcatattgcagcaggtatattgggtatattagcaggtctattccatctcagtgttcgt
cctccccaacgtttatacaaaggattacgtatggggaatattgaaactgtcctctccagt
agtattgctgctgtgttttttgcagctttcattgtggccggaacaatgtggtatggttcc
gcaaccactccgatcgaattatttggtcctactcgttaccagtgggatcagggatacttc
caacaagaaatagatcgacgagttcgtgccggtctggctgaaaatctgagtctatcagaa
gcttggtcaaaaattcccgaaaaacttgctttttatgattacattgggaataatccagct
aaaggggggttattcagggcgggtgcaatggacaatggagatggaattgctgttggttgg
ttaggacaccctattttcaaagataaaaatggacatgagctttttgtacgtcgtatgcct
acctttttcgaaacatttccagtcgttctagtagatgaagaaggaattgtgaaagccgat
gttccttttaggagagcagaatcaaaatatagtgttgaacaagtaggtgtaactgttgag
ttctatggtggtgaacttgatggagttagttttggtgatcctgctatagtcaaaaaatat
gctagacgcgcacaattaggtgaaatttttgagttagatcgtgctactttgaaatcggat
ggtgtttttcggagtagcccaaggggttggtttacttttgggcatgctacatttgctctt
cttttcttttttggacatatttggcatggtgctagaactctattcagagatgtttttgcc
ggtattgatccggatttggatgctcaagtagaatttggggcattccaaaaactgggagat
ccaactactaaaagacaagtggtataa

DBGET integrated database retrieval system