Kaistella jeonii: NCTC13459_00097
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Entry
NCTC13459_00097 CDS
T06863
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cjg
Kaistella jeonii
Pathway
cjg03030
DNA replication
cjg03410
Base excision repair
cjg03420
Nucleotide excision repair
cjg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13459_00097 (polA)
03410 Base excision repair
NCTC13459_00097 (polA)
03420 Nucleotide excision repair
NCTC13459_00097 (polA)
03440 Homologous recombination
NCTC13459_00097 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjg03032
]
NCTC13459_00097 (polA)
03400 DNA repair and recombination proteins [BR:
cjg03400
]
NCTC13459_00097 (polA)
Enzymes [BR:
cjg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13459_00097 (polA)
DNA replication proteins [BR:
cjg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC13459_00097 (polA)
DNA repair and recombination proteins [BR:
cjg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC13459_00097 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13459_00097 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
ACS_CODH_B_C
DUF2202
DUF7397
Motif
Other DBs
NCBI-ProteinID:
VEI94522
LinkDB
All DBs
Position
1:114781..117612
Genome browser
AA seq
943 aa
AA seq
DB search
MSENNDKRLFLIDAYAMIFRGYYALIRSPRITSTGIDTSAIFGFTNSLIELIRRERPTHL
AVVFDVGQASVRTADYADYKANRSETPEAIKLAIPYIHRILKAMHVPILGLEGYEADDVI
GTIACKAEKENYTVFMVTPDKDFAQLVTPNIKMYKPGLKGAEFEILGVDEIKAKYEIEDP
KQVIDFLAMMGDAVDNIPGLEGVGEKTAKKFLKEYGSIEKLLENTADLKGKLKEKVENSA
ERGILSKKLATIICDAPIEFHQEQYDLDDPDFEKVKEVFDEIEFRRLYENLYRAFAPAAT
VASTSNKNSAEEKVQKPVIVNQTMQLDLFANFEDLDQATTTKETVSDSDHLYQYIYSPKA
QKVLVHNLLQQKAVSFDTEITSLDEMEADLIGMSFSYKKGLAYYIPFSEKREEVLETLEI
FRPFFEKKEIVKIAHNLKTDYKILKQYGIEVEGAIFDTMIAHYLLNPDGRHAMEYLSEMY
LGYKPVAIESLIGKGKNQISFKELSVEEQTKFAAEDADISWRLYEVFAPQLKIENLEDLF
YKVEMPLMKVLAKMELEGISLDKKWLEQESKDLENDLRQLEKTIFELSGEEFNMNSPKQL
GEVLFEKMQLDPKAKKTKSGQYATSEDILQKLSSKHEIIKHILEYRTYQKLKSTYVDALP
LQIDKDDHRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVANPGNKLIAAD
YSQIELRLIAAISEEDNMIKAFQDGEDIHASTASKLFNIPLEEVTKTQRSQAKTVNFGIL
YGQGAFGLAEQTGLSRKEAKEMIESYFETYPKLKKYMADQVIKAQEMGYVETILNRKRHL
KDINSANFVVKAHAERNAVNAPIQGSAADVIKLAMIKIDEQFTEQNLKTKMLLQVHDELV
FEAPEEELETVTALIKNEMESAYKTTVPLIVEVGVGDNWLEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaacaacgataaacgccttttcctcatcgatgcttatgcgatgattttccgt
ggatattatgcactcatcagaagtcccagaattacaagtaccggaatcgatacttcggca
atttttggttttaccaattcattaattgaacttattcgcagggaaagaccaacgcattta
gccgttgtttttgatgtgggtcaagcgagtgtaagaactgcagattatgcagattataaa
gcgaaccggagcgaaactcctgaagcaataaaactcgctattccttacatccatcgcatc
ttaaaagccatgcacgttccgattttgggactggaaggatatgaagcagatgatgtgatc
ggaacaattgcgtgcaaagcggaaaaagaaaattacaccgtatttatggtgacgcctgac
aaagattttgcacaactcgtaactccaaatattaaaatgtataaacccggtttgaaaggc
gctgagtttgaaattttaggcgttgatgaaatcaaagcgaaatacgaaatagaagatcca
aaacaggtcatcgatttccttgcaatgatgggcgacgcggttgataatattcccggcttg
gaaggtgttggagaaaaaacagcgaagaaatttctgaaggaatatggcagcatcgaaaag
ttgttagaaaatactgccgatcttaaaggaaaactcaaagaaaaagtggagaattctgcc
gagcgaggaattctttccaaaaaattagcaacgattatttgtgacgctccaatcgagttt
catcaggaacaatatgatttagatgaccctgactttgaaaaggtaaaagaagttttcgac
gaaattgaatttcgccgattgtatgaaaatttgtatcgtgcttttgcacctgctgctaca
gttgcttcaacttcaaataaaaattcggctgaagaaaaagttcaaaaaccagttattgtc
aatcaaacgatgcagctcgatctgttcgccaatttcgaagatttagatcaggcaacaacg
accaaagaaaccgtttcagatagcgatcatctataccaatacatctattctccaaaagcg
cagaaagttttagttcataatcttttgcagcaaaaagctgtgagttttgataccgaaatt
acatctttagacgagatggaagctgatttgatcggtatgagtttcagttacaaaaaaggt
ttggcgtactatattcctttttctgaaaagcgggaagaagttttagaaacattggaaatt
ttccgtcctttttttgaaaagaaggaaattgtaaaaattgctcataatttaaaaacagat
tacaaaattctaaagcaatacggaattgaagttgaaggtgcgattttcgataccatgatc
gcgcattaccttttaaatccagatggtcgtcatgcgatggaatatctttctgaaatgtat
ttgggctacaaacctgttgcaatcgaatcattaattggaaaaggaaaaaatcagatcagt
ttcaaggaactttctgtggaagaacaaacgaaatttgccgcagaagatgccgatatttcg
tggagattgtacgaagtttttgcgccacaattgaaaatagaaaacctcgaagatcttttt
tataaagtagaaatgcctttaatgaaagttctggcaaaaatggaactcgaaggaatttcc
ctcgataaaaaatggctcgaacaggaaagtaaagatctggaaaacgatctgcgtcaactg
gagaaaacgatttttgaattgtcaggtgaagaatttaatatgaattctccgaaacagttg
ggcgaagttttgtttgaaaaaatgcagctcgacccaaaagcaaaaaagacaaaatccggc
caatacgcaacttcagaggatattctgcagaaattatcttccaagcatgaaatcattaaa
cacattttagaatatcgaacgtatcaaaaattaaaatcaacgtacgtcgatgcgctgcct
ttgcaaattgacaaagacgatcatcgcgttcataccaatttctctcaaacaactgctgcg
actggacgtttagcaagtgtaaatccgaatttacagaatatcccgatccgaactttgcgt
ggacaacaaatccgcggggcttttgtcgcaaatcctggaaataaattaattgcagcagat
tattctcaaattgaattgcgactgattgcagcgatttctgaggaagataatatgatcaaa
gcttttcaggatggcgaagatattcacgcttctacggcttcaaaattatttaatattcct
ttggaagaagttacgaaaacccagcgttcacaagcaaaaaccgttaattttggaatcctt
tatggacaaggtgcgtttggtttggccgaacaaaccggactttccagaaaagaagccaag
gaaatgatcgaatcttactttgaaacttatcccaagttgaaaaaatatatggcagatcag
gttatcaaagcgcaggaaatgggatatgtggaaactattttgaacagaaaaagacattta
aaagatatcaattcagccaattttgtcgtgaaagctcacgcagaaagaaatgcggtgaat
gcaccaattcagggaagtgcagccgatgtcattaaattggcgatgatcaaaatcgacgag
caattcaccgaacaaaatttaaaaacaaaaatgcttttgcaggttcatgatgaacttgtt
tttgaagcaccggaagaagaactggaaaccgtaacagctttaattaaaaatgaaatggaa
tctgcttataaaacgaccgttcctttaatagtcgaagttggagtaggagacaactggttg
gaagcgcattaa
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