Kaistella jeonii: NCTC13459_00544
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Entry
NCTC13459_00544 CDS
T06863
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cjg
Kaistella jeonii
Brite
KEGG Orthology (KO) [BR:
cjg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjg03032
]
NCTC13459_00544
03400 DNA repair and recombination proteins [BR:
cjg03400
]
NCTC13459_00544
Enzymes [BR:
cjg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC13459_00544
DNA replication proteins [BR:
cjg03032
]
Prokaryotic type
DNA Topoisomerases
NCTC13459_00544
DNA repair and recombination proteins [BR:
cjg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC13459_00544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
VEI94957
LinkDB
All DBs
Position
1:complement(600224..601333)
Genome browser
AA seq
369 aa
AA seq
DB search
MKNPETDLIASLTPSKILKIMKDPVKSAKAVHLTYTSDHEYDGIVRRKSGKKYAYFIGDE
KIKDQEEIQRINKLAIPPAWENVWICSLQNGHLQATGIDAKQRKQYRYHSLWNALRNHTK
FYRMLQFGYALPQMRLQLEKDLALRNLEKTKVLAVVVSLMERTNIRIGNNVYEKLYGSFG
LTTLKDRHVNIQGQKMHFSFKGKKGIYHDIDLKNNKLAKAVQNCKDIPGKELFQYYDEDG
KRHAIESGMVNEYIKEISGDDFTAKDFRTWSGTVNALIAFKEIGEAENDREYKSKVKEAL
EVVASHLGNTGNVCRKYYVHPLVINLYENHSIKKYMDELDQIEVNDGKTGLTKEETVVMK
ILENEKLQS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcctgaaaccgatcttatcgcctctttaactccttcaaaaattctaaaaatc
atgaaggatcccgtaaaatctgcaaaagcagtgcacctgacttacacgtctgatcacgaa
tatgatggaatcgtgagaaggaaatctggtaaaaaatatgcctactttataggagacgaa
aaaataaaagatcaagaagaaattcaacgcatcaacaaactggcaattccgcccgcctgg
gaaaatgtgtggatctgttctctacaaaatggtcatcttcaggcaaccggtatcgatgcg
aaacaacgcaaacaatatcgttatcattcactttggaatgctttgcggaaccataccaaa
ttttaccgtatgcttcagtttggttatgctttaccacaaatgcggttgcagttagaaaaa
gatcttgctctcagaaatttagaaaagaccaaagttcttgcagtggtcgtgagcttaatg
gaaagaacgaatattaggatcggtaataacgtgtatgaaaaattatacggctcttttggt
ttaactactttgaaagaccgacatgtcaatattcaaggacaaaaaatgcatttctctttt
aaaggtaaaaaagggatttatcatgacatcgatctgaaaaataataaactggcgaaagct
gtccagaactgtaaagatattcccggtaaagaactctttcaatattatgatgaagacgga
aaaaggcacgcgattgaatctggaatggtcaacgaatatattaaggagatcagcggcgac
gattttactgcgaaagattttagaacttggtcaggaaccgtgaatgcgttaattgctttt
aaagaaattggagaagcagaaaatgatagagaatataaatctaaagtaaaagaagcttta
gaagtggtcgcatctcacttgggaaatacaggaaatgtttgtcgaaaatattatgttcat
cctttagttatcaatctttacgagaaccattccatcaaaaaatatatggacgaactcgat
caaatcgaagtaaatgatgggaaaactggtttaacgaaagaggaaaccgtcgtgatgaaa
atattagaaaatgaaaaattacagtcctag
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