Kaistella jeonii: NCTC13459_00924
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Entry
NCTC13459_00924 CDS
T06863
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cjg
Kaistella jeonii
Pathway
cjg03420
Nucleotide excision repair
cjg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13459_00924 (pcrA)
03430 Mismatch repair
NCTC13459_00924 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjg03400
]
NCTC13459_00924 (pcrA)
Enzymes [BR:
cjg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13459_00924 (pcrA)
DNA repair and recombination proteins [BR:
cjg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13459_00924 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC13459_00924 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
LRR_5
Phage_blade
Motif
Other DBs
NCBI-ProteinID:
VEI95329
LinkDB
All DBs
Position
1:complement(1006567..1008897)
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AA seq
776 aa
AA seq
DB search
MDYLKGLNEAQYEAVTALEGPLMVLAGAGSGKTRVLTMRIAHLITNLVDPFNILALTFTN
KAAKEMKIRIAKVVGDSEARSLWMGTFHSVFARILRSEAHFLGFPSNFTIYDSQDSLNVI
RKVLKELNIDADLYKPKKVQARISNYKNNLITVKAYFNNPELIEADERANMKQIGLIYQK
YVDVCFRNGAMDFDDLLLKTNELLTRFPEILAKYQDRFRYILVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANILNILNFKKDYPDAKTVSLEQNYRSTQNIVNAANVV
ISKNVQQFKKNVFSENEKGEKIKVYRSLSDADEANFVASNIWEMHNSAQRKFTDFAILYR
TNSQTRAFEDALRRKNIPYRVYGGLSFYQRKEVKDLIAYLRLLVNENDSEALTRIINYPA
RGIGETTQNKLIVFADSQNISVTQVLDNLGFYAPRMSLNNGILTKLSDFWSMIKAFQVML
KTENVYSVTMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFLEEQIQLDDGDAS
LSNFLENIALSADTQTDKNDDDTDKVSLMTIHLSKGLEFPIVHLVGLEENLFPSFMSSST
REEVEEERRLFYVALTRAEKQAFFTYAISRFQWGKITDAEPSRFLSEVDAQYLEFINPAI
ESRFVNHSGITSNIFDDLPSEPRFYKKKEEKKTLQRDEPVAIPQNLKPVATARIINPSGN
SSQDIEVGDKVRHDRFGVGEVIFLDGTDAQNIKAKVKFQHEGMKNLILKFAKLTKI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggattacttaaaaggattaaatgaagcacaatatgaagccgtaaccgcattggaagga
ccactcatggttcttgcaggagctggttcggggaaaacgcgggtccttaccatgcgaatt
gctcatttaattaccaacctggttgatcctttcaatattttagcgctcacctttacaaat
aaggcggcaaaagaaatgaaaatcaggattgcgaaagtggtcggcgacagtgaagcgcga
agtctttggatgggaacttttcactctgtttttgcgcggatcttgagaagtgaagcgcat
tttcttggtttcccttctaattttacgatttatgattctcaggattctttgaatgtcatt
agaaaggtattgaaagaattgaacatagatgctgatctttacaagccaaaaaaagttcag
gcgagaatttcaaactataaaaataatctgatcaccgttaaagcctacttcaataatcca
gaattgattgaagctgatgagcgtgcaaacatgaaacagatcggtttaatttatcagaaa
tatgttgatgtttgtttccgaaatggtgcgatggattttgatgatttattattaaaaacc
aatgaattattaacgagatttcccgaaattttagcaaaatatcaggatagattccgatat
attttggttgatgagtatcaggataccaatcattcgcagtatttgattgtaaaggctttg
gcgtccaaatttgaaaacatttgtgttgtcggtgacgatgcacagtcgatttattccttt
cggggtgcgaatattttgaatattcttaattttaaaaaagattatcccgacgctaaaacc
gtttcccttgaacaaaattaccgctctacgcaaaatattgtgaacgcagcaaatgtggta
atttctaaaaacgtacagcagttcaaaaaaaatgtgttcagtgaaaacgaaaaaggggaa
aagataaaagtctaccgttccctttctgatgcggatgaagcgaatttcgtagcctcaaat
atttgggagatgcataattctgcgcagcgaaaatttaccgattttgctattttgtaccga
acgaactctcaaacacgagcttttgaagatgcattaagaagaaaaaatattccctatcgc
gtttacggcggattatccttctaccaaaggaaagaagtgaaagatctgatcgcatatctt
cgacttttggtgaatgaaaatgatagtgaagctttaacaagaatcattaattatcccgct
cgtggaattggagaaaccactcaaaataaattgatcgtttttgccgattctcaaaatatt
tctgtcactcaggttttagataatcttgggttttacgcgccgagaatgagtttaaataac
ggaattctaacgaaactttcagatttttggtcgatgatcaaagcatttcaggtaatgttg
aaaaccgaaaatgtgtacagcgttacgatggaggttgcgaaaagaagtggactcattaaa
tttttgaaagatgaccaaactccggaaggaatttcacgcgtagaaaatgtacaggaatta
atgaattcgatgcagggatttctggaagaacagattcagttggatgatggagatgcgtcg
ctttctaattttctggaaaacattgcgctttctgcggatactcaaactgataaaaacgac
gatgataccgataaagtttctttgatgacgattcacctttcaaaaggtttagagtttcca
attgttcatttggttggtttggaagaaaatttatttcccagttttatgagttcttcaacc
agagaagaagttgaagaagagaggcgattattttatgtggctttaacgagagctgaaaag
caggctttttttacttatgcaatttcgagatttcagtggggaaaaattactgatgcagaa
ccatcgagatttttaagtgaagtcgacgctcaatatttagaatttataaatcctgcgatc
gaaagtagatttgtaaatcattccggaattacctccaatattttcgatgatctaccgagc
gaaccgagattttataaaaagaaagaggagaagaaaacgcttcagcgagatgagccggtt
gcaatacctcaaaatttaaaacctgttgctacggcaaggatcattaatccaagcggaaat
tcttcccaagatattgaagtgggtgacaaagttcgtcacgaccgttttggggtgggcgaa
gtaatttttctggatggtacagatgcgcaaaacattaaggcgaaagtgaaatttcagcat
gaaggcatgaaaaatctaattttgaagttcgccaaactgacgaagatttaa
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