Kaistella jeonii: NCTC13459_01419
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Entry
NCTC13459_01419 CDS
T06863
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cjg
Kaistella jeonii
Pathway
cjg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13459_01419 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjg03019
]
NCTC13459_01419 (recQ_2)
03400 DNA repair and recombination proteins [BR:
cjg03400
]
NCTC13459_01419 (recQ_2)
Enzymes [BR:
cjg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13459_01419 (recQ_2)
Messenger RNA biogenesis [BR:
cjg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC13459_01419 (recQ_2)
DNA repair and recombination proteins [BR:
cjg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13459_01419 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
PgdA_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VEI95808
LinkDB
All DBs
Position
1:complement(1515982..1519218)
Genome browser
AA seq
1078 aa
AA seq
DB search
MMKNLLLDLIAKKSNEHGKPLFILKGFSIATITTVYKSLQNNRKLPISGGKILITEIEKK
YRDIIKKLMFSEKADFILYEEAIKISSFDLFGRKIVLIDSGIATLYNYEGDAQPFDTEKN
LFNLKASSTSILDSYYSEIIAEESFTKVAHLDIVSRIYDEIGDLLEVIELFEAKQIKPKT
VLIENLPEDAVWFESNGSDLSSISNEIFNGEKISKKYNIVADSEVYNDLVKRRDAERING
VLHGLGSEVNWFKTSNVTDAEVSPVVTKLFKKHWGDDKVFRNILFYDAPEVSNEVKEISQ
GEVVQQIINQAEIAYKNFSSKEKNPYSDVFLTAPTGAGKSLLFQVPAFYLSEKYNLVTII
ISPLIALMKDQVNAIKVNRGFEKVAYINSELSLTDREEIINDTHDGKIDILYLSPELFLS
YSIDYFVGERTLGLLVVDEAHLVTTWGRDFRVDYWFLGNHLNKLRKYVQEFPILTVTATA
VYGGDNDMVYDTIDSLYLNNTIKYIGKVTRDNIGFDISLEEIKGQGFRKAKLLKTVAFIK
EAIESGKKTLIYCPYTTHIKDIYELLDHNGKMNVCTYYGSMDADLKQDAFMKYLHNNVKV
MICTKAFGMGVDIPDIELVYHHAPSGNLADYVQEIGRSARLDHINGIAKTDYSSKDLSFT
KMLYGLSSIKPWELSEIMRKIYKVYEIRKSQNFLIDINQFQHIYPEDMQLDNKVKSGIMM
IEKDLLQKYGFNVLIGRPKNLFAHVFARIVNAEFDPFLKEFGCYATYIKDKSVEEKGYKV
VCIRLDELWTEKFSFLSFPFLKSKFFKKELFTDFPSVSPQQEIEIELHNDYDKILPIFRK
YLDGIIYSFGRLHDRLFFKQDFEVGFGSYIADHSKIKDPEYQRQLTNIINKVSSIIFSVY
IAGNDHGFLQRTDRTGEGNPKYRIINGSYHLTMSGMIKRFVNHFNALGVNRKKKYYLATS
NTYNEGIYMMAYLLEAFELGTYIVAGGKMPVMFIRLNDPKKFKKLSESYYENSLLKNVHN
RHKISMTLFTYFFNCGLDDQKRWQFIEDYFLGEDARTLIENYSKFSGHNHLDYVDGLN
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaatttacttctagatctgattgccaaaaaaagtaatgagcatggaaagcca
ttgtttattcttaaaggtttttccatagcaacaatcactactgtttataaatcacttcaa
aacaatagaaagcttccaatatctggaggtaaaatattaataacggaaattgaaaaaaag
tacagagatataattaagaagctaatgttttctgaaaaagcagattttattttgtacgaa
gaagccataaaaattagcagttttgatttattcggtagaaaaattgtgcttattgattcg
ggtatagcaacattgtacaattacgaaggagatgcacagccttttgatactgaaaaaaac
ctttttaatcttaaagcttcttcaactagtattcttgatagttattattctgaaattatc
gcagaagaaagttttacaaaagttgcacacttagatatcgtttcccgtatttatgatgaa
attggagatttattagaagttattgaattatttgaagcaaaacagattaaacctaaaaca
gtcttaattgagaatttacctgaggatgcggtatggtttgaaagtaatgggtctgattta
agttctatttctaatgaaattttcaatggtgaaaaaatttcaaaaaaatataatatcgtt
gctgatagtgaagtgtataatgaccttgtgaaaaggcgagatgctgaaagaatcaatgga
gtattacatggattgggaagtgaggtgaattggtttaagacaagtaatgttactgatgct
gaggtttctcctgtagttacaaaattattcaagaagcattggggtgatgataaagtattc
agaaatatattgttttacgatgcaccagaagtcagtaatgaagttaaagaaattagtcag
ggagaggttgttcagcagattataaatcaagctgaaattgcctacaaaaacttttcttct
aaagaaaaaaatccttattccgatgtgttccttacagctccaactggtgctggtaaaagt
ttactttttcaggtgcccgctttttatctttccgaaaaatataatttagtgaccattatt
atttcaccgcttattgcgctgatgaaggatcaagtaaacgctattaaagttaatagaggt
tttgaaaaagtagcctatattaattccgaactttcgttaactgatcgagaagaaattata
aacgatactcatgatgggaagattgatattttatacctctcaccagaactcttcctatca
tactcaatcgattattttgtcggagaaagaactcttggtttgctggttgttgatgaggcg
catctagtgactacttggggaagagattttcgcgttgattattggtttctagggaatcat
ttaaataaacttcgtaaatatgttcaggaattcccaattctcaccgttactgcaaccgca
gtttatggcggagataatgatatggtttacgacaccattgacagtttataccttaacaat
accataaagtacatcggtaaagttacccgtgataatattggatttgatattagtcttgag
gaaattaaaggtcaaggatttagaaaagcaaaattacttaagactgttgcttttattaaa
gaggctatagagtcaggtaaaaaaaccttaatttattgtccttacactactcatataaaa
gatatttatgagttgttggatcataatggtaaaatgaatgtctgcacttactatggttct
atggatgccgacctgaagcaggatgcatttatgaaatatctacataataatgtgaaagtg
atgatttgcaccaaagcgtttgggatgggggtagatattcccgatattgaacttgtttat
catcatgcacccagtggtaatcttgcggattatgtacaagagatcggtcgttctgccaga
ttagatcacattaatggaattgcaaaaactgattatagttccaaagatctttcgtttacc
aagatgttatatggtctttcttctattaagccatgggaactttctgaaattatgcgaaag
atttacaaggtatatgaaattagaaaatcccaaaatttcctcatcgacattaatcagttt
caacatatctatcctgaagatatgcaattggataataaagtgaaaagcgggataatgatg
attgaaaaagacctgttacaaaaatatggattcaatgttctaatcggtcgtcccaaaaat
cttttcgctcacgtatttgccagaattgttaatgctgaattcgatccgtttctcaaagaa
tttggatgttatgcaacatacataaaagataaaagtgttgaagagaaaggttataaggta
gtctgtataagacttgatgaattgtggactgaaaaattttcctttttaagttttccattt
ttaaaatcgaaattttttaaaaaagaactttttaccgattttccgtccgtaagtcctcag
caagaaattgaaattgaattacataatgattacgataagatcttgccgatatttagaaaa
tatttagatggaattatttattcatttggtagattacatgatagattattcttcaagcag
gattttgaagtgggatttggtagttacattgcagaccactcgaaaataaaagatccagaa
tatcagcggcaattaaccaacatcattaataaagtttcgtcaattatttttagcgtttat
attgctggtaatgatcacggtttcttgcaaagaacagacagaacaggtgaaggaaatcca
aaatatagaataattaatggatcttatcatttaacaatgtcaggaatgataaagcggttt
gttaatcattttaatgcattaggtgtgaatcgtaaaaagaaatattatttggcaacatct
aatacatataatgaagggatttatatgatggcatatttacttgaagcctttgaattggga
acatatattgtagccggtggtaaaatgccggtgatgtttatccgtcttaatgacccgaaa
aaatttaaaaaactaagcgaatcatactatgaaaatagtttgctaaaaaatgtacataat
agacacaaaatttcaatgaccctttttacgtacttctttaattgtggtctagatgatcag
aagagatggcagtttatagaagattacttcctaggtgaggatgcaagaactttaattgag
aattattccaaattttctggacataatcatttggattatgtggacggattgaactaa
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