Kaistella jeonii: NCTC13459_01590
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Entry
NCTC13459_01590 CDS
T06863
Symbol
recQ_4
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cjg
Kaistella jeonii
Pathway
cjg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13459_01590 (recQ_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjg03019
]
NCTC13459_01590 (recQ_4)
03400 DNA repair and recombination proteins [BR:
cjg03400
]
NCTC13459_01590 (recQ_4)
Enzymes [BR:
cjg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13459_01590 (recQ_4)
Messenger RNA biogenesis [BR:
cjg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC13459_01590 (recQ_4)
DNA repair and recombination proteins [BR:
cjg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13459_01590 (recQ_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
HTH_40
RecQ_Zn_bind
ResIII
HTH_24
HTH_36
GerE
HTH_38
Motif
Other DBs
NCBI-ProteinID:
VEI95976
LinkDB
All DBs
Position
1:1700558..1702747
Genome browser
AA seq
729 aa
AA seq
DB search
MKSPLAILQQYFGYDSFRLYQASAVENVIAKKDTFVLMPTGGGKSLCYQIPALVLEGTAI
VISPLIALMKDQVDALRVNGISAAFLNSSMNPNEQNETFRQLKNGELKLLYVAPEKLSAD
NGHFLNLLKEIKISLFAVDEAHCVSHWGHDFRPDYLFLNGIKKGFSETPIIALTASADEI
TRQDIIKQLNLQNPTVLISSFDRPNIKYFVQPKQSVLTHILQYLKEHPNDSGIIYCLSRK
GTEDLANNLKENGVDAEFYHAGISSIERAKVQDDFIKDKTRVMVATIAFGMGIDKSNVRF
VIHADLPKNIESYYQETGRAGRDGLPSEAILFYSIADVMKLKKFAMVEGNEEQSSLMLRK
VQQMTDFAEMQKCRRQYLMEYFGESHPGNCNSCDYCLSDFESWDATLDAQKLLSAIFRLK
ERYGKNLIIDFLRGSKGVKITEYMKGLPTYGIGANSDKTHWQNLIKQLTINGFLRDSEGE
FSVLKLTESSNEVLFKKRKVNLQKVKELAKAVSVEEIETTYQTNEIDANQELFDELRILR
RQQAEKENVPPYVIFSDATLMEMAGYLPTTIDELGEISGFGAFKIEKYGDLFLKVIVNYC
TNHNLSSKISEKTPKKQRAPKQENKSLAGTYTITFDLYKAGNNLEEIAKIRNLSLNTIQN
HLANFVELGTIKPSELIDVTKIDPIIAIAKTQTIQSLKAIKEELGEEFTYFEINIAVAFY
KWEEKKNLK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctcctttagcaatacttcaacaatactttggttacgatagtttccgactctat
caagcgagcgcagttgaaaatgtaattgcgaaaaaagacaccttcgtcttgatgccaact
ggcggtggaaaatctttgtgctatcaaattccagctttggtattggaaggaactgcgatt
gttatttcccccttaattgctttgatgaaagatcaggttgatgctttgcgcgtcaatgga
atttctgcagcatttctaaattcttcgatgaatccaaatgagcaaaatgaaacttttcgt
caattgaaaaatggtgaattaaaactgttgtatgttgcgcccgaaaagttgagcgcagat
aatggtcactttttaaatttactgaaagaaatcaaaatttccctttttgcagtagatgaa
gcgcactgtgtttcacattggggacatgattttcgtccggattatttatttttaaatgga
attaaaaaaggattttcagaaacgccaatcattgcattaaccgcaagtgccgacgaaata
acacggcaagatatcatcaaacaattaaatcttcaaaatccgactgttttaatatcctct
tttgacagacctaatattaaatattttgtgcaaccaaagcagtcggttttaactcatatt
ctgcaatatttaaaagagcatccaaacgattcgggaattatttactgtttatcccgaaaa
ggaacggaagatctggcgaataatttgaaagaaaacggtgttgatgcagaattttatcat
gcaggaatttcttcaatagaaagagctaaagttcaggatgattttataaaagacaaaact
cgggtcatggttgctacaattgcctttggaatgggaatagacaaaagtaacgttcgtttt
gtaatccacgcagatctccctaaaaacatcgaaagttattatcaggaaacaggaagagcc
ggaagagatggattgccgagtgaagccattttgttctattccattgcggatgtgatgaag
ctgaaaaaatttgcaatggtcgaaggaaatgaagaacagtcgagtttaatgcttcggaaa
gtgcaacaaatgaccgattttgccgagatgcaaaaatgcagacgacaatatctgatggaa
tacttcggagaatctcatcctggaaattgtaattcctgcgattattgtttgagtgatttt
gaaagttgggacgccacattggatgctcaaaaattgttaagtgcaatatttagattaaaa
gaacgctacggaaaaaatttgattattgattttttacgaggttcaaaaggtgtaaaaatc
accgagtacatgaaaggtttaccaacgtatggaattggcgcaaattcagataaaacacat
tggcaaaatttaattaaacaattaacaataaatggatttttaagggattcagaaggtgaa
ttttctgttttaaaactaacggaaagcagcaatgaagttttatttaaaaagagaaaagtc
aatttacagaaagtaaaagaattggcaaaagcagtgtcagtcgaagaaatagaaaccact
tatcaaaccaatgaaatcgatgcaaatcaggaattgtttgatgaactaagaattttgaga
agacaacaagccgagaaagaaaatgtgccaccgtacgtgattttctccgatgcaacttta
atggaaatggcgggttatcttcctactacgattgacgagcttggggaaattagtggattt
ggcgcctttaaaatagaaaaatatggagatttatttttaaaagtaattgtaaattattgc
acaaaccataatttgagcagtaaaatatcagagaaaacaccgaaaaaacaacgtgcgccg
aaacaagagaataaaagtctggcaggaacatacacaataactttcgatctgtacaaagct
ggaaataacttggaagagattgcgaaaatcaggaatttgtctttaaatactattcaaaat
cacttggctaatttcgtagaattgggaacgattaaaccaagcgagttgatagatgtgacc
aaaatagatcccataattgctattgcaaaaactcaaactattcaatcattgaaagcgatc
aaagaagaattaggagaagaatttacttactttgaaataaatatcgcagttgctttctat
aaatgggaagagaaaaaaaatttaaaataa
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