Kaistella jeonii: NCTC13459_02826
Help
Entry
NCTC13459_02826 CDS
T06863
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
cjg
Kaistella jeonii
Pathway
cjg02020
Two-component system
cjg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cjg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC13459_02826
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC13459_02826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjg03021
]
NCTC13459_02826
Transcription machinery [BR:
cjg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC13459_02826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF7336
Med9
Motif
Other DBs
NCBI-ProteinID:
VEI97167
LinkDB
All DBs
Position
1:2973782..2975236
Genome browser
AA seq
484 aa
AA seq
DB search
MRLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEKAEESKEEEYSSLDETYEDE
GTDSINTDFDVNEYIFDDEPAYKTSSNNYSADDEEFDNQSLLTEGQSLYDYLLEQIRLIN
IDGDDLKIAEYIIGNLDNDGYLRREVKQIVDDLAFSLGVYTTKEKAEDILENYVQKLDPS
GVGARGLQECLLLQIEKKVSADKAVILAANILRNQFDALTNKHYNKIIQKYDIEEEDLKD
ALEVISKLSPKVGGNFDTQTITINQEIIPDFVIHVKDNGEKGVDVHPTLNSKNAPSLRVS
DEYKDILTTYSHDKKSAEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTISAIVKLQKN
YFITGDEKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKNLFSDSLTNDDG
EEVSTKEIKNHLMDIINAENKRKPLTDDALVVLLKEKGYNIARRTIAKYREQLSIPVARL
RKEL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcggccagaaattggcaccgcaacaaattcagttgatgaagttgatccagctt
cacaccttagaatttgaggaagaattagaacgcgaattagaagaaaatccggccttggaa
aaagcggaagaatcaaaagaagaagaatattcctctcttgatgaaacgtatgaagatgaa
ggtacagacagcatcaacacagatttcgatgtaaatgaatatatttttgatgatgaaccg
gcttataaaaccagttctaacaattattcggcagacgatgaagaatttgacaatcagtcg
ctcttaacagaaggacaatcgctctacgattaccttttggagcagatccgtttgatcaat
attgatggtgatgatctgaaaattgcagaatatatcatcggaaaccttgataacgacgga
tatcttcgaagagaagtgaaacagatcgttgacgatttggcgttttctctgggagtttac
accacgaaagaaaaagcggaagatatattggagaattacgttcaaaaactggatccttca
ggagttggcgcaagaggtttacaggaatgtcttctgttgcaaatagagaaaaaagtaagt
gctgataaagccgttattttagctgcaaatatcctcagaaatcaattcgatgcattgaca
aataagcattacaataaaatcatccagaaatacgatatcgaggaagaagatctgaaagat
gctttggaagtgatttcaaaactatccccaaaagttggtggaaatttcgatactcagacg
atcaccattaaccaggaaatcataccggattttgtaattcatgtaaaagataatggtgaa
aaaggagtagatgttcatccaactttgaatagcaaaaacgcaccgtctttgcgtgtttca
gatgagtacaaagatatcttgaccacttattctcacgataaaaaatctgcagaacataaa
caggcagcgcttttcatcaagcaaaaattagatgctgcaaaatggtatatcgatgcgatt
aaccaaagacagaatactttgcttcaaacgatttctgccatcgtgaaactacagaaaaat
tatttcattacaggtgatgaaaaatcgctaaaaccaatgattttaaaggatgttgccgat
attacgggttttgatatctctacaatttctcgagtagtaaaaagcaaatatgcagatact
ccaaatgggatcgtttatttaaaaaatctcttctcagattcattgaccaatgatgatggt
gaagaagtttctacgaaagaaattaagaatcatttgatggatatcatcaatgcagaaaat
aagagaaagcctttaacagatgacgctttggttgttttgttgaaagaaaaaggatataac
attgcaagacgaaccattgcaaaatatcgggaacagctcagtattccggttgcaagatta
cgaaaagaactctaa
DBGET
integrated database retrieval system
