Corynebacterium jeddahense: CJEDD_02630
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Entry
CJEDD_02630 CDS
T08816
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
cjh
Corynebacterium jeddahense
Pathway
cjh00550
Peptidoglycan biosynthesis
cjh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CJEDD_02630 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjh01002
]
CJEDD_02630 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cjh01011
]
CJEDD_02630 (dacB)
Enzymes [BR:
cjh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CJEDD_02630 (dacB)
Peptidases and inhibitors [BR:
cjh01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CJEDD_02630 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cjh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CJEDD_02630 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Transpeptidase
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
WCZ38147
LinkDB
All DBs
Position
complement(537347..538642)
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AA seq
431 aa
AA seq
DB search
MKRAGIAAAVASISVGVCVTTVAQAQDAEETATTTTTQTSAAPTTGYYDDAGSWVPPSRG
RAPDTDACPQATWPPEPVSTSERSASSPLPLPVTYDGPCGVTAADGYKVPDGVVASAWLV
ADLDSGEVVAMKDPHGRYRPASIIKVLLALTVIDELPLDQKVPVSAESANQEGSRAGIGE
GGDYTVKDLLHGLILSSGNDCAHALAQALGGDEVTLLKVNELAKKLGMTDTRATSYSGLD
SPGMSTSAWDMGLAYRAAFANPTFADIADTEHYPFPGFGEEPAFELWNDNKLYLNDPDGI
GGKTGYTDDANHTFVGAVNHDGRRLVAVVLDTAAYDHRAWEQAQMLLHEAYGVRSSVATL
EAASATTTAPLTTEAAPSPTPSAGAGSESGSGEGTAWKSWWAYLIVAGVLALAAVVAALS
LGTGAKRRRRR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagcgggcattgccgcggcggtggcgtcgataagcgtgggcgtatgcgtgacg
acggttgcgcaagcgcaggacgccgaagaaacggcgacgaccacgacaacccagacctcg
gcggcgccgacgaccggctactacgacgacgcgggcagctgggtgccgccgagccgcggc
cgcgccccggacactgacgcctgcccgcaggcgacgtggccgccggagccggtgtccacc
tccgagcgctccgcgagcagcccgctgcccctgcccgtcacgtacgacgggccgtgcggg
gtgaccgccgccgacggctacaaggtgcccgatggcgtggtcgcctccgcgtggctcgtc
gccgacctggattccggcgaggtggtggcgatgaaggacccgcacgggcgctaccgcccc
gcctccatcatcaaagtgctgctcgcgctcaccgtcatcgacgagctgccgctcgaccag
aaggtgccggtctcggccgagtccgcgaaccaggagggctcccgcgccggcatcggcgag
ggcggggactacacagtcaaggacctcctgcacggtctcatcctctcctccggcaacgac
tgcgcccacgcgctggcccaggcgctcggaggcgacgaggtgacgctgctcaaggtcaac
gagctggcaaagaagctgggcatgaccgatacccgcgccacctcctactccgggctggac
agccccggcatgtccacctccgcgtgggacatggggctggcgtaccgcgccgcgtttgcc
aaccccaccttcgccgacatcgcggacaccgagcactacccgttccccggcttcggcgag
gagcccgccttcgagctgtggaacgacaacaagctctacctcaacgacccggacggcatc
ggcggcaagaccggctacaccgacgacgcgaaccacaccttcgtcggcgccgtcaaccac
gacggccgccggctcgtggccgttgtcctggacaccgcggcctacgaccaccgcgcgtgg
gagcaggcgcagatgctgctgcacgaggcgtacggggtgcgaagctccgtcgccacgctg
gaggccgcctccgcgaccacgacggcgccgctcacgacggaggccgccccctcccccacg
ccctcggctggggcgggatccgaatccggatccggggaagggacggcctggaagtcctgg
tgggcctacctcatcgtggcgggcgtgctcgcgctcgccgcggtggtggccgcgctcagt
ctcgggacaggagcgaagcgacgccgacgccgatag
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